Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS06055 and MMJJ_RS06060 are separated by 194 nucleotidesMMJJ_RS06060 and MMJJ_RS06065 are separated by 86 nucleotidesMMJJ_RS06065 and MMJJ_RS06070 are separated by 69 nucleotidesMMJJ_RS06070 and MMJJ_RS06075 are separated by 35 nucleotides MMJJ_RS06055: MMJJ_RS06055 - S-methyl-5-thioribose-1-phosphate isomerase, at 1,124,620 to 1,125,585 _RS06055 MMJJ_RS06060: MMJJ_RS06060 - aspartate--tRNA(Asn) ligase, at 1,125,780 to 1,127,096 _RS06060 MMJJ_RS06065: MMJJ_RS06065 - metal-sulfur cluster assembly factor, at 1,127,183 to 1,127,482 _RS06065 MMJJ_RS06070: MMJJ_RS06070 - histidine--tRNA ligase, at 1,127,552 to 1,128,802 _RS06070 MMJJ_RS06075: MMJJ_RS06075 - DNA-binding protein Alba, at 1,128,838 to 1,129,107 _RS06075
Group Condition MMJJ_RS06055 MMJJ_RS06060 MMJJ_RS06065 MMJJ_RS06070 MMJJ_RS06075
no stress control McCas_formate_complete no stress control -0.3 N.D. N.D. N.D. -0.4
stress McCas_formate_complete Fluorophosphate 31.25 mM -0.4 N.D. N.D. N.D. -0.4
stress McCas_formate_complete sodium bromide 125 mM +0.1 N.D. N.D. N.D. -0.7
stress McCas_formate_complete silver chloride 0.125 mM +0.2 N.D. N.D. N.D. -0.6
stress McCas_formate_complete Rifampicin 0.25 mM +0.6 N.D. N.D. N.D. -0.6
nitrogen source N2 fixation, H2 media +0.4 N.D. N.D. N.D. -0.4
nitrogen source Formate N-free with 2mM Adenosine -0.5 N.D. N.D. N.D. +0.6
stress McCas_formate_complete Ticarcillin 12.5 mM +0.7 N.D. N.D. N.D. -0.2
nitrogen source H2 N-free with 10mM Ammonium chloride +0.4 N.D. N.D. N.D. +0.3
iron Iron excess (2.5x) , H2 media +0.4 N.D. N.D. N.D. +0.4
nitrogen source H2 N-free with 10mM D-glucosamine +0.3 N.D. N.D. N.D. +0.4
stress McCas_formate_complete Nitrofurantoin 0.025 mM +0.7 N.D. N.D. N.D. +0.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE +0.1 N.D. N.D. N.D. +0.7
nitrogen source H2 N-free with 2mM Adenosine +0.4 N.D. N.D. N.D. +0.3
stress McCas_formate_complete Nitrofurantoin 0.025 mM +0.2 N.D. N.D. N.D. +0.6
biofilm H2 pooled triplicate biofilm cells +0.6 N.D. N.D. N.D. +0.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.7 N.D. N.D. N.D. +0.1
stress McCas_formate_complete Irgasan 0.0125 mM +0.8 N.D. N.D. N.D. +0.1
nitrogen source H2 N-free with 2mM Adenosine +0.4 N.D. N.D. N.D. +0.5
planktonic H2 pooled triplicate planktonic cells +0.6 N.D. N.D. N.D. +0.3
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE +0.6 N.D. N.D. N.D. +0.5
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE +0.6 N.D. N.D. N.D. +0.6
iron Iron excess (2.5x) , H2 media +0.8 N.D. N.D. N.D. +0.5
nitrogen source H2 N-free with 2mM Adenosine +0.7 N.D. N.D. N.D. +0.6
iron Iron excess (2.5x) , H2 media +0.6 N.D. N.D. N.D. +0.7
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.9 N.D. N.D. N.D. +0.4
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.8 N.D. N.D. N.D. +0.6
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE +1.1 N.D. N.D. N.D. +0.5
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +1.1 N.D. N.D. N.D. +0.5
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 +1.5 N.D. N.D. N.D. +0.4
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