Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS05955 and MMJJ_RS05960 are separated by 186 nucleotidesMMJJ_RS05960 and MMJJ_RS05965 are separated by 10 nucleotidesMMJJ_RS05965 and MMJJ_RS05970 are separated by 74 nucleotidesMMJJ_RS05970 and MMJJ_RS05975 are separated by 113 nucleotides MMJJ_RS05955: MMJJ_RS05955 - radical SAM protein, at 1,108,222 to 1,109,085 _RS05955 MMJJ_RS05960: MMJJ_RS05960 - DUF169 domain-containing protein, at 1,109,272 to 1,109,964 _RS05960 MMJJ_RS05965: MMJJ_RS05965 - MFS transporter, at 1,109,975 to 1,111,345 _RS05965 MMJJ_RS05970: MMJJ_RS05970 - MJ0307 family thioredoxin, at 1,111,420 to 1,111,662 _RS05970 MMJJ_RS05975: MMJJ_RS05975 - sulfurtransferase TusA family protein, at 1,111,776 to 1,112,591 _RS05975
Group Condition MMJJ_RS05955 MMJJ_RS05960 MMJJ_RS05965 MMJJ_RS05970 MMJJ_RS05975
stress McCas_formate_complete sulfate 125 mM -0.2 -0.4 -0.1 -1.0 -0.1
stress McCas_formate_complete Irgasan 0.0125 mM -0.1 -0.1 +0.1 -1.1 -0.1
nitrogen source H2 N-free with 2mM Adenosine -0.0 -0.2 +0.2 -0.8 +0.3
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE +0.3 -0.2 +0.1 -0.5 +0.3
nitrogen source Formate N-free with 2mM Adenosine -0.4 +0.5 +0.3 -0.9 +0.7
stress McCas_formate_complete Irgasan 0.0125 mM -0.6 +0.3 -0.1 +0.3 +0.4
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM -0.4 +0.5 +0.5 -0.4 +0.2
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM -0.1 +0.6 +0.1 -1.1 +0.9
nutrient t1 formate McAA thiamine dropout -0.1 +0.3 +0.2 -0.4 +0.5
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE +0.4 +0.2 +0.5 -0.4 +0.1
stress McCas_formate_complete Chlorpromazine 0.0166666666666667 mM -0.4 +0.0 +0.1 +0.6 +0.5
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE +0.4 +0.2 +0.5 -0.3 +0.1
nitrogen source Formate N-free with 2mM Adenosine +0.1 +0.3 +0.2 -0.2 +0.6
stress McCas_formate_complete Novobiocin 0.0125 mM -0.2 +0.1 +0.2 +0.6 +0.3
stress McCas_formate_complete 3-nitroxypropanol 0.00208333333333333 mM -0.4 +0.4 +0.2 +0.5 +0.4
stress McCas_formate_complete sodium bromide 125 mM -0.2 +0.1 +0.1 +1.1 -0.0
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.3 +0.3 +0.5 -0.1 +0.2
nitrogen source N2 fixation, H2 media +0.8 +0.5 +0.0 -0.1 -0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.4 +0.2 +0.5 -0.2 +0.2
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.2 +0.2 +0.3 +0.4 +0.3
iron Iron limitation (0.2x), H2 media +0.2 -0.0 +0.1 +0.6 +0.5
stress McCas_formate_complete Nitrofurantoin 0.025 mM +0.1 +0.6 -0.0 +0.7 +0.0
nitrogen source H2 N-free with 2g/L casaminos +0.2 +0.3 +0.1 +0.6 +0.2
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM +0.4 +0.2 +0.1 +0.6 +0.1
nitrogen source Formate N-free with 2mM Adenosine -0.3 +0.5 +0.2 +0.5 +0.7
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM -0.1 -0.0 -0.1 +1.2 +0.5
iron Iron excess (2.5x) , H2 media +0.2 +0.4 +0.1 +0.8 +0.2
nitrogen source H2 N-free with 2mM Adenosine +0.1 +0.7 +0.1 +0.3 +0.5
stress McCas_formate_complete Nitrofurantoin 0.025 mM -0.4 +0.4 +0.0 +1.2 +0.6
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM +0.5 +0.4 +0.5 +0.4 +0.4
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