Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS05860 and MMJJ_RS05865 are separated by 29 nucleotidesMMJJ_RS05865 and MMJJ_RS05870 are separated by 114 nucleotidesMMJJ_RS05870 and MMJJ_RS05875 are separated by 1 nucleotidesMMJJ_RS05875 and MMJJ_RS05880 are separated by 2 nucleotides MMJJ_RS05860: MMJJ_RS05860 - tRNA-Leu, at 1,087,790 to 1,087,874 _RS05860 MMJJ_RS05865: MMJJ_RS05865 - tRNA-His, at 1,087,904 to 1,087,978 _RS05865 MMJJ_RS05870: MMJJ_RS05870 - pyridoxal 5'-phosphate synthase glutaminase subunit PdxT, at 1,088,093 to 1,088,656 _RS05870 MMJJ_RS05875: MMJJ_RS05875 - hypothetical protein, at 1,088,658 to 1,091,747 _RS05875 MMJJ_RS05880: MMJJ_RS05880 - hypothetical protein, at 1,091,750 to 1,094,833 _RS05880
Group Condition MMJJ_RS05860 MMJJ_RS05865 MMJJ_RS05870 MMJJ_RS05875 MMJJ_RS05880
nitrogen source H2 N-free with 10mM D-glucosamine N.D. N.D. -2.5 +0.1 +0.1
nitrogen source Formate N-free with 2mM Adenosine N.D. N.D. -2.5 +0.2 +0.2
nitrogen source H2 N-free with 2mM Adenosine N.D. N.D. -1.8 +0.2 +0.1
nitrogen source H2 N-free with 10mM D-glucosamine N.D. N.D. -1.5 +0.0 +0.1
nitrogen source N2 fixation, H2 media N.D. N.D. -1.4 -0.2 +0.2
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM N.D. N.D. -1.4 +0.1 +0.0
nitrogen source H2 N-free with 2mM Adenosine N.D. N.D. -1.4 -0.0 +0.1
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM N.D. N.D. -1.6 +0.3 +0.2
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM N.D. N.D. -1.0 +0.1 -0.1
nitrogen source H2 N-free with 10mM D-glucosamine N.D. N.D. -1.1 +0.0 +0.1
nitrogen source H2 N-free with 2g/L casaminos N.D. N.D. -0.9 +0.2 +0.2
nitrogen source H2 N-free with 2g/L casaminos N.D. N.D. -0.8 +0.1 +0.2
nitrogen source Formate N-free with 2mM Adenosine N.D. N.D. -1.0 +0.2 +0.3
stress McCas_formate_complete Novobiocin 0.0125 mM N.D. N.D. +1.2 +0.0 -0.0
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. N.D. +0.6 +0.3 +0.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. N.D. +0.7 +0.2 +0.3
stress McCas_formate_complete phosphite 25 mM N.D. N.D. +1.0 +0.2 +0.1
no stress control McCas_formate_complete no stress control N.D. N.D. +1.1 +0.1 +0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. N.D. +0.8 +0.3 +0.2
stress Formate 100 mM hypophosphite N.D. N.D. +1.2 +0.0 +0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE N.D. N.D. +1.1 +0.1 +0.2
stress McCas_formate_complete Phenazine methosulfate 0.0166666666666667 mM N.D. N.D. +1.3 -0.0 +0.1
stress McCas_formate_complete Ticarcillin 12.5 mM N.D. N.D. +1.0 +0.3 +0.0
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE N.D. N.D. +1.1 +0.2 +0.2
stress McCas_formate_complete selenate 31.25 mM N.D. N.D. +1.4 +0.0 +0.1
no stress control McCas_formate_complete no stress control N.D. N.D. +1.5 +0.0 +0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. N.D. +1.2 +0.2 +0.2
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 N.D. N.D. +1.5 +0.2 +0.0
stress McCas_formate_complete sulfate 125 mM N.D. N.D. +1.5 +0.4 +0.1
stress McCas_formate_complete Irgasan 0.0125 mM N.D. N.D. +1.9 +0.0 +0.2
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