Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS05810 and MMJJ_RS05815 overlap by 4 nucleotidesMMJJ_RS05815 and MMJJ_RS05820 overlap by 11 nucleotidesMMJJ_RS05820 and MMJJ_RS05825 are separated by 85 nucleotidesMMJJ_RS05825 and MMJJ_RS05830 are separated by 158 nucleotides MMJJ_RS05810: MMJJ_RS05810 - precorrin-4 C(11)-methyltransferase, at 1,083,120 to 1,083,884 _RS05810 MMJJ_RS05815: MMJJ_RS05815 - hypothetical protein, at 1,083,881 to 1,084,078 _RS05815 MMJJ_RS05820: MMJJ_RS05820 - DUF2304 domain-containing protein, at 1,084,068 to 1,084,427 _RS05820 MMJJ_RS05825: MMJJ_RS05825 - aspartate carbamoyltransferase, at 1,084,513 to 1,085,421 _RS05825 MMJJ_RS05830: MMJJ_RS05830 - 30S ribosomal protein S8e, at 1,085,580 to 1,085,966 _RS05830
Group Condition MMJJ_RS05810 MMJJ_RS05815 MMJJ_RS05820 MMJJ_RS05825 MMJJ_RS05830
stress McCas_formate_complete Chlorpromazine 0.0166666666666667 mM -0.5 -1.2 -3.4 N.D. N.D.
iron control, 1x iron with casaminos and vitamins, H2 media -4.6 -0.0 -0.2 N.D. N.D.
iron Iron excess (2.5x) , H2 media -4.2 -0.0 -0.6 N.D. N.D.
nitrogen source H2 N-free with 10mM Ammonium chloride -3.8 +0.0 -0.8 N.D. N.D.
nutrient t1 formate McAA B12 dropout -3.3 -0.2 -0.9 N.D. N.D.
nitrogen source H2 N-free with 10mM Ammonium chloride -3.6 +0.0 -0.8 N.D. N.D.
iron Iron excess (2.5x) , H2 media -4.1 +0.2 -0.5 N.D. N.D.
iron control, 1x iron with casaminos and vitamins, H2 media -3.8 -0.2 -0.3 N.D. N.D.
nitrogen source Formate N-free with 2mM Adenosine -2.9 -0.3 -1.1 N.D. N.D.
nitrogen source H2 N-free with 2g/L casaminos -3.8 +0.2 -0.7 N.D. N.D.
nutrient t1 formate McAA B12 dropout -3.0 -0.1 -0.9 N.D. N.D.
nitrogen source H2 N-free with 2g/L casaminos -3.7 +0.0 -0.3 N.D. N.D.
iron Iron excess (2.5x) , H2 media -3.3 +0.1 -0.7 N.D. N.D.
nitrogen source H2 N-free with 10mM D-glucosamine -3.0 +0.3 -1.1 N.D. N.D.
iron Iron limitation (0.2x), H2 media -3.3 +0.2 -0.7 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.7 +0.2 -0.2 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.9 -0.0 +0.3 N.D. N.D.
nitrogen source Formate N-free with 2mM Adenosine -2.8 +0.3 -1.1 N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.6 -0.1 +0.4 N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -3.3 +0.6 -0.1 N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -1.9 +0.7 -1.6 N.D. N.D.
planktonic H2 pooled triplicate planktonic cells -3.5 +0.4 +0.4 N.D. N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -3.0 +0.5 +0.7 N.D. N.D.
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -3.3 +0.3 +1.1 N.D. N.D.
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.1 +0.4 +1.1 N.D. N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -2.8 +0.5 +0.8 N.D. N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -2.8 +0.5 +0.7 N.D. N.D.
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -2.8 +0.2 +1.0 N.D. N.D.
biofilm H2 pooled triplicate biofilm cells -3.1 +0.7 +1.0 N.D. N.D.
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -2.5 +0.4 +1.0 N.D. N.D.
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MMJJ_RS05810
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MMJJ_RS05830
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