Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS05370 and MMJJ_RS05375 are separated by 72 nucleotidesMMJJ_RS05375 and MMJJ_RS05380 are separated by 121 nucleotidesMMJJ_RS05380 and MMJJ_RS05385 are separated by 14 nucleotidesMMJJ_RS05385 and MMJJ_RS05390 are separated by 11 nucleotides MMJJ_RS05370: MMJJ_RS05370 - LysR family transcriptional regulator, at 997,004 to 997,846 _RS05370 MMJJ_RS05375: MMJJ_RS05375 - radical SAM protein, at 997,919 to 998,971 _RS05375 MMJJ_RS05380: MMJJ_RS05380 - hypothetical protein, at 999,093 to 999,584 _RS05380 MMJJ_RS05385: MMJJ_RS05385 - hypothetical protein, at 999,599 to 1,000,402 _RS05385 MMJJ_RS05390: MMJJ_RS05390 - tRNA pseudouridine(13) synthase TruD, at 1,000,414 to 1,001,583 _RS05390
Group Condition MMJJ_RS05370 MMJJ_RS05375 MMJJ_RS05380 MMJJ_RS05385 MMJJ_RS05390
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -3.1 -4.6 -3.3 -0.6 -0.8
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -2.4 -2.6 -2.6 -0.1 -0.0
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM -3.1 -1.9 -3.3 +0.3 +0.3
nutrient t1 formate McAA B12 dropout -1.6 -2.2 -4.0 +0.1 +0.2
nutrient t1 formate McAA p-aminobenzoic dropout -1.3 -2.3 -3.9 -0.0 +0.3
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -0.8 -2.5 -3.4 -0.3 -0.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -1.3 -2.3 -3.4 -0.1 +0.0
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -1.0 -2.4 -3.6 -0.1 -0.0
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -0.9 -2.4 -3.6 -0.0 -0.1
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.2 -2.4 -1.4 -0.0 +0.1
nutrient t1 formate vitamin complete -1.0 -2.2 -4.0 -0.0 +0.4
rich t1 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -2.2 -1.2 -3.0 -0.1 -0.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -0.7 -2.3 -3.6 +0.0 +0.0
stress McCas_formate_complete hypophosphite 62.5 mM -1.3 -1.5 -3.0 -0.5 +0.2
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -1.8 -1.9 -3.0 +0.1 +0.3
nutrient t1 formate McAA folic dropout -0.9 -2.0 -3.4 +0.0 +0.1
nutrient t1 formate McAA lipolic dropout -0.9 -2.1 -3.3 +0.1 +0.2
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -2.6 -2.6 -0.8 +0.0 +0.0
nutrient t1 formate McAA lipolic dropout -1.2 -2.0 -2.9 +0.0 +0.2
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.4 -2.9 -3.4 -0.1 +0.0
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM -2.9 -1.6 -1.6 +0.2 -0.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -2.6 -2.2 -1.4 +0.0 +0.2
nitrogen source Formate N-free with 2mM Adenosine -2.3 -1.3 -2.4 -0.4 +0.4
stress McCas_formate_complete hypophosphite 62.5 mM -1.2 -1.7 -3.1 +0.1 +0.2
stress McCas_formate_complete selenate 31.25 mM -1.3 -1.4 -3.1 +0.2 +0.2
nitrogen source Formate N-free with 2mM Adenosine -3.6 -0.7 -1.5 -0.1 +0.6
stress McCas_formate_complete Nitrofurantoin 0.025 mM -0.8 -0.9 -4.2 -0.2 +0.7
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM -0.3 -1.4 -4.2 +0.3 +0.5
stress McCas_formate_complete Irgasan 0.0125 mM +0.4 -1.4 -4.1 -0.1 +0.3
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM -0.3 -1.8 -3.3 +0.3 +0.3
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