Fitness for 5 genes in Methanococcus maripaludis JJ

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 217 experiments or choose conditions or try the comparative fitness browser

500 ntMMJJ_RS04995 and MMJJ_RS05000 overlap by 1 nucleotidesMMJJ_RS05000 and MMJJ_RS05005 are separated by 8 nucleotidesMMJJ_RS05005 and MMJJ_RS05010 are separated by 321 nucleotidesMMJJ_RS05010 and MMJJ_RS05015 are separated by 32 nucleotides MMJJ_RS04995: MMJJ_RS04995 - Tfx family DNA-binding protein, at 928,027 to 928,476 _RS04995 MMJJ_RS05000: MMJJ_RS05000 - mRNA surveillance protein pelota, at 928,476 to 929,522 _RS05000 MMJJ_RS05005: MMJJ_RS05005 - hypothetical protein, at 929,531 to 930,271 _RS05005 MMJJ_RS05010: MMJJ_RS05010 - Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain, at 930,593 to 931,672 _RS05010 MMJJ_RS05015: MMJJ_RS05015 - hypothetical protein, at 931,705 to 932,475 _RS05015
Group Condition MMJJ_RS04995 MMJJ_RS05000 MMJJ_RS05005 MMJJ_RS05010 MMJJ_RS05015
iron Iron excess (2.5x) , H2 media -4.6 N.D. -0.1 -0.3 N.D.
nitrogen source H2 N-free with 2g/L casaminos -4.5 N.D. -0.0 -0.2 N.D.
iron Iron excess (2.5x) , H2 media -4.4 N.D. +0.1 -0.3 N.D.
nitrogen source H2 N-free with 10mM Ammonium chloride -4.4 N.D. -0.0 -0.2 N.D.
nutrient t1 formate McAA lipolic dropout -4.4 N.D. +0.0 -0.2 N.D.
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -4.4 N.D. +0.1 -0.2 N.D.
iron Iron limitation (0.2x), H2 media -4.3 N.D. +0.1 -0.3 N.D.
iron control, 1x iron with casaminos and vitamins, H2 media -4.5 N.D. +0.2 -0.1 N.D.
stress McCas_formate_complete Spiramycin 0.1 mM -3.7 N.D. -0.1 -0.5 N.D.
iron Iron limitation (0.2x), H2 media -4.1 N.D. -0.0 -0.2 N.D.
iron Iron excess (2.5x) , H2 media -4.1 N.D. +0.2 -0.3 N.D.
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -4.1 N.D. +0.0 -0.1 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -4.3 N.D. +0.2 -0.0 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -3.9 N.D. +0.1 -0.3 N.D.
iron control, 1x iron with casaminos and vitamins, H2 media -3.9 N.D. +0.1 -0.4 N.D.
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -3.9 N.D. -0.1 -0.2 N.D.
nitrogen source H2 N-free with 2g/L casaminos -3.9 N.D. +0.0 -0.3 N.D.
iron control, 1x iron with casaminos and vitamins, H2 media -4.0 N.D. +0.1 -0.2 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE -3.6 N.D. +0.2 -0.8 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -3.5 N.D. +0.2 -0.7 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -4.1 N.D. +0.1 +0.0 N.D.
nutrient t1 formate McAA lipolic dropout -3.8 N.D. +0.1 -0.2 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -3.4 N.D. +0.3 -0.6 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -4.0 N.D. +0.2 +0.1 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.9 N.D. +0.1 +0.1 N.D.
stress McCas_formate_complete deta nonoate 0.025 mM -3.5 N.D. +0.5 -0.7 N.D.
stress McCas_formate_complete Sulfaquinoxaline 0.1 mM -3.4 N.D. +0.3 -0.5 N.D.
stress McCas_formate_complete selenate 31.25 mM -3.7 N.D. +0.3 +0.2 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.3 N.D. +0.2 +0.7 N.D.
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -4.0 N.D. +0.2 +1.5 N.D.
remove
MMJJ_RS04995
plot		 remove
MMJJ_RS05000
plot		 remove
MMJJ_RS05005		 remove
MMJJ_RS05010
plot		 remove
MMJJ_RS05015
plot