Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS04450 and MMJJ_RS04455 are separated by 89 nucleotidesMMJJ_RS04455 and MMJJ_RS04460 are separated by 72 nucleotidesMMJJ_RS04460 and MMJJ_RS04465 are separated by 11 nucleotidesMMJJ_RS04465 and MMJJ_RS04470 are separated by 108 nucleotides MMJJ_RS04450: MMJJ_RS04450 - diphthamide biosynthesis enzyme Dph2, at 828,864 to 829,793 _RS04450 MMJJ_RS04455: MMJJ_RS04455 - phosphomethylpyrimidine synthase, at 829,883 to 831,163 _RS04455 MMJJ_RS04460: MMJJ_RS04460 - L-threonylcarbamoyladenylate synthase, at 831,236 to 831,856 _RS04460 MMJJ_RS04465: MMJJ_RS04465 - MTAP family purine nucleoside phosphorylase, at 831,868 to 832,629 _RS04465 MMJJ_RS04470: MMJJ_RS04470 - CTP-dependent riboflavin kinase, at 832,738 to 833,121 _RS04470
Group Condition MMJJ_RS04450 MMJJ_RS04455 MMJJ_RS04460 MMJJ_RS04465 MMJJ_RS04470
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -2.6 N.D. N.D. -0.0 N.D.
planktonic H2 pooled triplicate planktonic cells -1.3 N.D. N.D. -0.6 N.D.
stress Formate 100 mM hypophosphite -1.1 N.D. N.D. -0.7 N.D.
stress Formate 50 mM hypophosphite -1.0 N.D. N.D. -0.7 N.D.
stress Formate 100 mM hypophosphite -1.1 N.D. N.D. -0.5 N.D.
stress Formate 50 mM hypophosphite -0.9 N.D. N.D. -0.6 N.D.
nitrogen source H2 N-free with 2g/L casaminos -1.0 N.D. N.D. -0.5 N.D.
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -0.8 N.D. N.D. -0.6 N.D.
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -0.8 N.D. N.D. -0.6 N.D.
biofilm H2 pooled triplicate biofilm cells -0.8 N.D. N.D. -0.5 N.D.
nitrogen source H2 N-free with 10mM Ammonium chloride -0.6 N.D. N.D. -0.8 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -1.0 N.D. N.D. -0.3 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -1.2 N.D. N.D. +0.1 N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -1.2 N.D. N.D. +0.2 N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -1.1 N.D. N.D. +0.2 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE +0.7 N.D. N.D. -1.1 N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE +0.7 N.D. N.D. -0.9 N.D.
nitrogen source N2 fixation, H2 media +0.9 N.D. N.D. -0.7 N.D.
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM +0.9 N.D. N.D. -0.5 N.D.
nitrogen source Formate N-free with 2mM Adenosine -0.9 N.D. N.D. +1.3 N.D.
nitrogen source H2 N-free with 2mM Adenosine -0.5 N.D. N.D. +1.1 N.D.
stress McCas_formate_complete Phenazine methosulfate 0.0166666666666667 mM +1.2 N.D. N.D. -0.4 N.D.
nitrogen source H2 N-free with 2mM Adenosine -0.5 N.D. N.D. +1.7 N.D.
stress McCas_formate_complete Phenazine methosulfate 0.0166666666666667 mM +1.3 N.D. N.D. -0.1 N.D.
stress McCas_formate_complete 3-nitroxypropanol 0.00208333333333333 mM +0.9 N.D. N.D. +0.5 N.D.
nitrogen source Formate N-free with 2mM Adenosine +0.3 N.D. N.D. +1.0 N.D.
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM +0.5 N.D. N.D. +1.0 N.D.
nitrogen source Formate N-free with 2mM Adenosine +0.1 N.D. N.D. +1.5 N.D.
stress McCas_formate_complete Novobiocin 0.0125 mM +1.0 N.D. N.D. +0.8 N.D.
nitrogen source H2 N-free with 2mM Adenosine -0.4 N.D. N.D. +2.3 N.D.
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