Fitness for 5 genes in Methanococcus maripaludis JJ

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 217 experiments or choose conditions or try the comparative fitness browser

500 ntMMJJ_RS03750 and MMJJ_RS03755 are separated by 20 nucleotidesMMJJ_RS03755 and MMJJ_RS03760 are separated by 198 nucleotidesMMJJ_RS03760 and MMJJ_RS03765 overlap by 1 nucleotidesMMJJ_RS03765 and MMJJ_RS03770 are separated by 259 nucleotides MMJJ_RS03750: MMJJ_RS03750 - rubredoxin, at 700,026 to 700,163 _RS03750 MMJJ_RS03755: MMJJ_RS03755 - hypothetical protein, at 700,184 to 700,543 _RS03755 MMJJ_RS03760: MMJJ_RS03760 - hydrogenase maturation nickel metallochaperone HypA, at 700,742 to 701,122 _RS03760 MMJJ_RS03765: MMJJ_RS03765 - hypothetical protein, at 701,122 to 701,583 _RS03765 MMJJ_RS03770: MMJJ_RS03770 - hypothetical protein, at 701,843 to 702,091 _RS03770
Group Condition MMJJ_RS03750 MMJJ_RS03755 MMJJ_RS03760 MMJJ_RS03765 MMJJ_RS03770
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 +0.4 -0.5 -3.6 -4.5 -0.5
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.2 -0.1 -4.2 -3.9 -0.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.1 -0.1 -4.2 -3.5 -0.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.1 -0.3 -4.2 -3.1 -0.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.1 +0.0 -3.9 -3.9 -0.1
iron control, 1x iron with casaminos and vitamins, formate media +0.1 -0.6 -5.0 -1.9 -0.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE +0.0 -0.3 -4.2 -3.0 -0.2
stress Formate 100 mM hypophosphite +0.1 -1.4 -3.5 -2.5 +0.0
iron control, 1x iron with casaminos and vitamins, H2 media +0.0 +0.4 -5.0 -2.8 +0.2
iron Iron excess (2.5x) , H2 media -0.1 +0.1 -5.0 -2.0 -0.1
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 +0.1 +0.0 -4.4 -2.7 -0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.1 -0.2 -4.3 -2.3 -0.2
iron control, 1x iron with casaminos and vitamins, H2 media -0.1 +0.2 -4.5 -2.6 +0.3
nutrient t1 formate McAA folic dropout -0.0 -0.1 -4.3 -2.3 +0.0
iron Iron excess (2.5x) , H2 media -0.2 +0.3 -5.0 -1.9 +0.2
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -0.1 +0.1 -3.8 -2.9 +0.2
iron Iron limitation (0.2x), formate media +0.1 -0.6 -4.2 -1.6 -0.1
iron control, 1x iron with casaminos and vitamins, formate media +0.1 -0.7 -3.5 -2.1 -0.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.1 -0.2 -3.2 -2.9 -0.1
nutrient t1 formate McAA riboflavin dropout +0.1 -0.1 -4.6 -1.4 -0.2
nutrient t1 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.0 -0.1 -4.2 -1.5 -0.3
iron control, 1x iron with casaminos and vitamins, formate media +0.0 -0.6 -4.0 -1.6 +0.1
stress Formate 100 mM hypophosphite +0.1 -1.3 -2.6 -2.2 -0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -0.2 -0.4 -2.5 -3.1 +0.3
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.2 -0.3 -3.2 -2.4 -0.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE +0.2 -0.2 -4.0 -1.7 -0.1
nitrogen source H2 N-free with 10mM D-glucosamine -0.1 +0.1 -4.0 -2.0 +0.3
iron Iron limitation (0.2x), H2 media -0.0 +0.2 -3.9 -2.0 +0.0
nitrogen source H2 N-free with 2g/L casaminos -0.1 +0.2 -3.0 -2.6 +0.2
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride +0.1 +0.3 -3.3 -2.4 +0.2
remove
MMJJ_RS03750
plot
remove
MMJJ_RS03755
plot
remove
MMJJ_RS03760
remove
MMJJ_RS03765
plot
remove
MMJJ_RS03770
plot