Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS03540 and MMJJ_RS03545 are separated by 0 nucleotidesMMJJ_RS03545 and MMJJ_RS03550 are separated by 110 nucleotidesMMJJ_RS03550 and MMJJ_RS03555 are separated by 105 nucleotidesMMJJ_RS03555 and MMJJ_RS03560 are separated by 45 nucleotides MMJJ_RS03540: MMJJ_RS03540 - TIGR00289 family protein, at 663,025 to 663,696 _RS03540 MMJJ_RS03545: MMJJ_RS03545 - flagella protein F, at 663,697 to 664,131 _RS03545 MMJJ_RS03550: MMJJ_RS03550 - tRNA-Val, at 664,242 to 664,318 _RS03550 MMJJ_RS03555: MMJJ_RS03555 - acetyl-CoA carboxylase biotin carboxylase subunit, at 664,424 to 665,929 _RS03555 MMJJ_RS03560: MMJJ_RS03560 - sodium-extruding oxaloacetate decarboxylase subunit alpha, at 665,975 to 667,684 _RS03560
Group Condition MMJJ_RS03540 MMJJ_RS03545 MMJJ_RS03550 MMJJ_RS03555 MMJJ_RS03560
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -5.2 -0.2 N.D. N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -3.8 -0.1 N.D. N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -3.6 +0.1 N.D. N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -3.7 +0.2 N.D. N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -3.3 -0.0 N.D. N.D. N.D.
planktonic H2 pooled triplicate planktonic cells -2.5 -0.8 N.D. N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.1 +0.1 N.D. N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.0 +0.1 N.D. N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -2.9 -0.0 N.D. N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -2.7 -0.0 N.D. N.D. N.D.
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -2.7 +0.0 N.D. N.D. N.D.
nitrogen source H2 N-free with 2mM Adenosine -1.8 -0.6 N.D. N.D. N.D.
biofilm H2 pooled triplicate biofilm cells -1.8 -0.4 N.D. N.D. N.D.
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -2.5 +0.4 N.D. N.D. N.D.
rich t1 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -2.0 -0.0 N.D. N.D. N.D.
rich t1 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -2.0 +0.0 N.D. N.D. N.D.
iron Iron excess (2.5x) , H2 media -1.7 -0.3 N.D. N.D. N.D.
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -2.3 +0.4 N.D. N.D. N.D.
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -1.9 -0.0 N.D. N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -1.9 +0.0 N.D. N.D. N.D.
nitrogen source H2 N-free with 2mM Adenosine -1.4 -0.4 N.D. N.D. N.D.
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -2.1 +0.4 N.D. N.D. N.D.
iron Iron excess (2.5x) , H2 media -1.6 -0.1 N.D. N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -1.9 +0.3 N.D. N.D. N.D.
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE -1.9 +0.3 N.D. N.D. N.D.
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -1.6 +0.1 N.D. N.D. N.D.
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -1.5 +0.1 N.D. N.D. N.D.
stress McCas_formate_complete hypophosphite 62.5 mM -1.2 +0.4 N.D. N.D. N.D.
stress McCas_formate_complete Sulfaquinoxaline 0.1 mM -1.2 +0.6 N.D. N.D. N.D.
stress McCas_formate_complete Chlorpromazine 0.0166666666666667 mM +1.7 -0.6 N.D. N.D. N.D.
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