Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS03490 and MMJJ_RS03495 are separated by 38 nucleotidesMMJJ_RS03495 and MMJJ_RS03500 are separated by 203 nucleotidesMMJJ_RS03500 and MMJJ_RS03505 are separated by 80 nucleotidesMMJJ_RS03505 and MMJJ_RS03510 are separated by 199 nucleotides MMJJ_RS03490: MMJJ_RS03490 - ribonuclease VapC, at 655,115 to 655,645 _RS03490 MMJJ_RS03495: MMJJ_RS03495 - hypothetical protein, at 655,684 to 655,932 _RS03495 MMJJ_RS03500: MMJJ_RS03500 - F420-dependent methylenetetrahydromethanopterin dehydrogenase, at 656,136 to 656,969 _RS03500 MMJJ_RS03505: MMJJ_RS03505 - trimeric intracellular cation channel family protein, at 657,050 to 657,679 _RS03505 MMJJ_RS03510: MMJJ_RS03510 - acyl-CoA dehydratase activase, at 657,879 to 658,619 _RS03510
Group Condition MMJJ_RS03490 MMJJ_RS03495 MMJJ_RS03500 MMJJ_RS03505 MMJJ_RS03510
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.5 -0.2 -3.5 +0.0 +0.1
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -3.4 -0.1 -3.9 +0.0 +0.3
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE -2.8 -0.2 -3.8 +0.0 +0.1
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM -4.4 -0.9 -1.2 -0.3 +0.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -3.2 -0.0 -3.0 -0.2 +0.2
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -2.2 -0.4 -3.8 +0.0 +0.3
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE -2.4 -0.1 -3.7 +0.1 +0.3
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM -4.6 -0.4 -0.6 +0.0 +0.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -1.2 -0.2 -4.1 -0.3 +0.4
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -3.6 -0.4 -1.3 +0.0 +0.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -4.4 -0.4 -0.5 -0.0 +0.2
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE -3.8 -0.1 -0.9 -0.1 +0.2
no stress control McCas_formate_complete no stress control -4.0 -0.4 -0.5 -0.4 +0.4
stress Formate 50 mM hypophosphite -0.9 -0.2 -3.8 +0.0 +0.0
stress McCas_formate_complete selenate 31.25 mM -4.0 -0.3 -0.2 -0.2 -0.1
nitrogen source H2 N-free with 2g/L casaminos 10mM Ammonium chloride -4.3 -0.1 -0.2 +0.0 -0.1
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -0.9 -0.0 -3.8 -0.3 +0.4
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -0.9 -0.1 -3.8 -0.2 +0.4
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -1.9 -0.3 -2.3 -0.1 +0.2
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 -5.1 -0.2 -0.1 +0.6 +0.4
stress McCas_formate_complete Irgasan 0.0125 mM -4.5 +0.1 -0.3 -0.3 +0.8
stress Formate 100 mM hypophosphite -1.3 -0.2 -3.0 +0.3 -0.0
no stress control McCas_formate_complete no stress control -3.6 -0.3 -0.6 -0.2 +0.4
stress McCas_formate_complete Ticarcillin 12.5 mM -4.7 -0.0 -0.1 -0.3 +0.9
stress McCas_formate_complete Rifampicin 0.25 mM -4.0 +0.3 -0.4 -0.4 +0.5
nitrogen source Formate N-free with 2mM Adenosine -2.2 +0.2 -2.3 -0.0 +0.1
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM -3.5 +0.3 -0.6 -0.4 +0.4
stress McCas_formate_complete Novobiocin 0.0125 mM -3.3 +0.9 -0.6 -0.4 +0.0
stress McCas_formate_complete sodium bromide 125 mM -3.2 -0.2 -0.6 +0.2 +0.6
iron Iron excess (2.5x) , H2 media -3.6 +0.4 -0.3 +0.2 +0.2
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