Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS02960 and MMJJ_RS02965 are separated by 0 nucleotidesMMJJ_RS02965 and MMJJ_RS02970 are separated by 266 nucleotidesMMJJ_RS02970 and MMJJ_RS02975 are separated by 38 nucleotidesMMJJ_RS02975 and MMJJ_RS02980 are separated by 18 nucleotides MMJJ_RS02960: MMJJ_RS02960 - RimK family alpha-L-glutamate ligase, at 552,340 to 553,290 _RS02960 MMJJ_RS02965: MMJJ_RS02965 - RimK-like ATPgrasp N-terminal domain-containing protein, at 553,291 to 553,896 _RS02965 MMJJ_RS02970: MMJJ_RS02970 - DUF378 domain-containing protein, at 554,163 to 554,411 _RS02970 MMJJ_RS02975: MMJJ_RS02975 - NAD(P)H-dependent oxidoreductase, at 554,450 to 554,944 _RS02975 MMJJ_RS02980: MMJJ_RS02980 - TatD family hydrolase, at 554,963 to 555,724 _RS02980
Group Condition MMJJ_RS02960 MMJJ_RS02965 MMJJ_RS02970 MMJJ_RS02975 MMJJ_RS02980
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 -0.1 -0.3 -0.1 -0.5 -0.1
stress Formate 100 mM hypophosphite -0.0 +0.1 -0.1 -0.6 -0.4
nitrogen source Formate N-free with 2mM Adenosine +0.2 -0.2 +0.1 -0.4 -0.4
stress McCas_formate_complete Novobiocin 0.0125 mM +0.3 -0.0 -0.2 -0.4 -0.3
nitrogen source Formate N-free with 2mM Adenosine +0.1 +0.4 +0.2 -0.6 -0.6
stress McCas_formate_complete Sulfaquinoxaline 0.1 mM +0.1 +0.3 -0.1 -0.4 -0.4
stress McCas_formate_complete Irgasan 0.0125 mM +0.1 +0.2 -0.3 -0.1 -0.5
nitrogen source H2 N-free with 10mM D-glucosamine -0.3 +0.0 +0.4 -0.5 -0.0
stress McCas_formate_complete Anhydrotetracycline 0.05 mM +0.1 +0.4 -0.0 -0.6 -0.3
stress McCas_formate_complete Antimycin A 0.01 mM +0.0 +0.6 -0.2 -0.5 -0.3
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE +0.2 +0.5 -0.3 -0.4 -0.2
stress McCas_formate_complete 3-nitroxypropanol 0.00208333333333333 mM +0.1 +0.4 -0.3 -0.3 -0.1
nitrogen source N2 fixation, H2 media +0.1 -0.4 +0.3 +0.4 -0.5
stress Formate 100 mM hypophosphite +0.1 +0.4 +0.2 -0.2 -0.7
no stress control McCas_formate_complete no stress control -0.1 +0.5 -0.2 +0.1 -0.4
stress McCas_formate_complete hypophosphite 62.5 mM +0.1 -0.1 +0.4 +0.1 -0.5
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.2 +0.4 -0.2 -0.1 -0.3
stress McCas_formate_complete deta nonoate 0.025 mM -0.0 +0.1 +0.3 -0.6 +0.2
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE +0.2 +0.7 -0.3 -0.2 -0.4
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE +0.2 +0.7 -0.2 -0.2 -0.2
stress McCas_formate_complete Nitrofurantoin 0.025 mM -0.2 +0.5 -0.1 -0.6 +0.5
stress McCas_formate_complete selenate 31.25 mM -0.3 +0.6 -0.3 +0.3 -0.0
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Casamino Acid FREE +0.2 +0.5 -0.1 -0.3 -0.1
iron Iron excess (2.5x) , H2 media -0.1 +0.3 +0.3 -0.3 +0.1
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM +0.1 +0.5 +0.0 -0.2 +0.4
stress McCas_formate_complete silver chloride 0.125 mM +0.3 +0.4 +0.2 -0.3 +0.3
no stress control McCas_formate_complete no stress control -0.0 +0.7 +0.0 +0.2 +0.2
nitrogen source H2 N-free with 2mM Adenosine +0.0 +0.2 +0.2 +0.4 +0.3
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM +0.2 +0.6 +0.1 +0.2 +0.4
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM +0.3 +0.4 +0.6 -0.2 +0.5
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