Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS01235 and MMJJ_RS01240 are separated by 7 nucleotidesMMJJ_RS01240 and MMJJ_RS01245 overlap by 4 nucleotidesMMJJ_RS01245 and MMJJ_RS01250 are separated by 36 nucleotidesMMJJ_RS01250 and MMJJ_RS01255 are separated by 350 nucleotides MMJJ_RS01235: MMJJ_RS01235 - excinuclease ABC subunit UvrA, at 236,245 to 239,100 _RS01235 MMJJ_RS01240: MMJJ_RS01240 - excinuclease ABC subunit UvrC, at 239,108 to 240,691 _RS01240 MMJJ_RS01245: MMJJ_RS01245 - excinuclease ABC subunit UvrB, at 240,688 to 242,628 _RS01245 MMJJ_RS01250: MMJJ_RS01250 - hypothetical protein, at 242,665 to 242,898 _RS01250 MMJJ_RS01255: MMJJ_RS01255 - YqhA family protein, at 243,249 to 243,806 _RS01255
Group Condition MMJJ_RS01235 MMJJ_RS01240 MMJJ_RS01245 MMJJ_RS01250 MMJJ_RS01255
stress McCas_formate_complete Irgasan 0.0125 mM -0.7 -0.4 -0.2 -1.3 +0.6
stress McCas_formate_complete Antimycin A 0.01 mM -0.7 -0.5 -0.2 -0.7 +0.3
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM -0.5 -0.7 -0.2 -0.8 +0.4
stress McCas_formate_complete Novobiocin 0.0125 mM -0.5 -0.1 -0.2 -1.1 +0.2
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM -0.6 -0.5 -0.4 -0.2 +0.0
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -0.3 -0.4 -0.2 -0.6 -0.1
stress McCas_formate_complete Anhydrotetracycline 0.05 mM -0.5 -0.3 -0.4 -0.4 +0.0
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE -0.3 -0.4 -0.1 -0.6 -0.1
stress McCas_formate_complete Rifampicin 0.25 mM -0.4 -0.5 -0.1 -0.7 +0.2
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM -0.7 -0.1 -0.2 -0.9 +0.4
stress McCas_formate_complete 2,2-dibromo-2-cyanoacetamide 0.00833333333333333 mM -0.6 -0.3 -0.4 -0.2 +0.1
no stress control McCas_formate_complete no stress control -0.5 -0.4 -0.2 -0.5 +0.1
stress McCas_formate_complete silver chloride 0.125 mM -0.6 -0.5 -0.3 -0.3 +0.3
stress McCas_formate_complete Irgasan 0.0125 mM -0.7 -0.5 -0.3 -0.0 +0.1
stress McCas_formate_complete 3-nitroxypropanol 0.00208333333333333 mM -0.5 -0.9 -0.2 -0.0 +0.4
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE -0.2 -0.2 +0.0 +0.2 -0.9
no stress control McCas_formate_complete no stress control -0.5 -0.4 -0.3 -0.2 +0.2
stress McCas_formate_complete Ticarcillin 12.5 mM -0.2 -0.3 -0.2 -0.8 +0.3
no stress control McCas_formate_complete no stress control -0.9 -0.4 -0.1 +0.1 +0.4
stress McCas_formate_complete phosphite 25 mM -0.6 -0.3 -0.4 +0.1 +0.2
stress McCas_formate_complete silver chloride 0.125 mM -0.6 -0.3 -0.4 +0.3 +0.1
stress McCas_formate_complete Nitrofurantoin 0.025 mM -0.6 -0.6 -0.1 +0.0 +0.5
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE -0.2 -0.1 -0.1 +0.5 -0.7
planktonic H2 pooled triplicate planktonic cells -0.3 -0.6 -0.4 +0.7 -0.1
stress McCas_formate_complete Fluorophosphate 31.25 mM -0.6 -0.6 -0.2 +0.1 +0.6
stress McCas_formate_complete Polymyxin B sulfate 0.05 mM -0.5 -0.5 -0.3 +0.4 +0.3
nitrogen source Formate N-free with 2mM Adenosine -0.0 -0.2 -0.3 +0.6 -0.5
stress McCas_formate_complete sulfate 125 mM -0.0 -0.6 -0.4 +0.7 +0.1
nitrogen source N2 fixation, H2 media -0.3 +0.9 +0.5 -0.4 -0.0
stress McCas_formate_complete sodium nitrite 0.416666666666667 mM -0.4 -0.2 -0.1 +0.6 +0.7
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