Fitness for 5 genes in Methanococcus maripaludis JJ

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500 ntMMJJ_RS00575 and MMJJ_RS00580 are separated by 22 nucleotidesMMJJ_RS00580 and MMJJ_RS00585 are separated by 9 nucleotidesMMJJ_RS00585 and MMJJ_RS00590 are separated by 388 nucleotidesMMJJ_RS00590 and MMJJ_RS00595 are separated by 13 nucleotides MMJJ_RS00575: MMJJ_RS00575 - carboxylating nicotinate-nucleotide diphosphorylase, at 107,402 to 108,241 _RS00575 MMJJ_RS00580: MMJJ_RS00580 - 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG, at 108,264 to 109,322 _RS00580 MMJJ_RS00585: MMJJ_RS00585 - S-layer protein, at 109,332 to 110,978 _RS00585 MMJJ_RS00590: MMJJ_RS00590 - class I SAM-dependent methyltransferase, at 111,367 to 112,227 _RS00590 MMJJ_RS00595: MMJJ_RS00595 - tetratricopeptide repeat protein, at 112,241 to 113,956 _RS00595
Group Condition MMJJ_RS00575 MMJJ_RS00580 MMJJ_RS00585 MMJJ_RS00590 MMJJ_RS00595
nutrient t1 formate McAA lipolic dropout N.D. -6.1 +0.0 -0.1 -0.2
iron Iron limitation (0.2x), formate media N.D. -6.1 +0.1 -0.1 -0.2
nitrogen source H2 N-free with 2g/L casaminos N.D. -5.9 -0.0 -0.0 -0.2
nutrient t1 formate McAA B12 dropout N.D. -6.0 +0.3 -0.1 -0.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE N.D. -5.1 -0.2 -0.2 -0.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. -5.4 -0.1 -0.0 -0.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. -5.2 -0.1 +0.0 -0.5
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. -5.2 -0.2 -0.1 -0.3
nitrogen source H2 N-free with 10mM Ammonium chloride N.D. -5.9 +0.4 -0.1 -0.1
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. -5.1 -0.2 -0.0 -0.5
rich t2 H2 McCas, 5g/L bicarb, 40 psi H2CO2 N.D. -4.9 -0.2 -0.2 -0.5
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. -5.2 -0.1 -0.0 -0.3
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Vitamin FREE N.D. -5.1 -0.2 -0.1 -0.3
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 FREE N.D. -5.2 -0.0 -0.0 -0.3
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 & Casamino Acid FREE N.D. -5.0 -0.2 -0.1 -0.2
rich t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2 N.D. -5.0 -0.1 -0.1 -0.2
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE N.D. -4.6 -0.1 -0.3 -0.4
nitrogen source H2 N-free with 10mM D-glucosamine N.D. -5.1 -0.1 -0.0 -0.1
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE N.D. -4.9 +0.0 -0.1 -0.2
nitrogen source H2 N-free with 10mM D-glucosamine N.D. -5.0 +0.0 -0.1 -0.1
stress Formate 100 mM hypophosphite N.D. -5.0 -0.0 -0.1 -0.0
rich t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 FREE N.D. -4.7 -0.1 -0.1 -0.2
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE N.D. -4.6 +0.1 -0.0 -0.5
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 Vitamin & Casamino Acid FREE N.D. -4.7 +0.0 -0.1 -0.3
nutrient t2 H2 McCas, 2.5g/L bicarb, 200 mM MOPs, 40 psi H2CO2, SO4 Vitamin & Casamino Acid FREE N.D. -4.5 +0.0 -0.1 -0.4
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE N.D. -4.6 +0.0 +0.0 -0.5
iron Iron excess (2.5x) , H2 media N.D. -5.7 +1.0 +0.0 -0.3
nutrient t2 Formate McCas, 2.5g/L bicarb, 200 mM MOPs, 20 psi N2CO2, SO4 & Vitamin FREE N.D. -4.6 +0.1 -0.0 -0.5
iron Iron excess (2.5x) , H2 media N.D. -5.8 +1.2 +0.0 -0.3
iron Iron excess (2.5x) , H2 media N.D. -5.8 +1.1 +0.0 -0.2
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