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Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS19640 and LRK55_RS19645 are separated by 48 nucleotides
LRK55_RS19645 and LRK55_RS19650 are separated by 74 nucleotides
LRK55_RS19650 and LRK55_RS19655 are separated by 102 nucleotides
LRK55_RS19655 and LRK55_RS19660 are separated by 10 nucleotides
LRK55_RS19640: LRK55_RS19640 - DsbC family protein, at 257,015 to 257,896
_RS19640
LRK55_RS19645: LRK55_RS19645 - energy transducer TonB, at 257,945 to 258,583
_RS19645
LRK55_RS19650: LRK55_RS19650 - hypothetical protein, at 258,658 to 259,008
_RS19650
LRK55_RS19655: LRK55_RS19655 - lytic transglycosylase domain-containing protein, at 259,111 to 259,731
_RS19655
LRK55_RS19660: LRK55_RS19660 - hypothetical protein, at 259,742 to 260,461
_RS19660
Group
Condition
LRK55
_RS19640
LRK55
_RS19645
LRK55
_RS19650
LRK55
_RS19655
LRK55
_RS19660
pH
R2A_PIPES pH 4.25
-0.4
-0.1
-0.4
-0.2
+0.1
pH
R2A_PIPES pH 4.25
-0.7
-0.3
-0.1
-0.1
+0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.4
+0.3
-0.3
+0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.2
-0.2
-0.2
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
-0.7
+0.4
+0.2
+0.1
no stress control
no stress control
+0.1
-0.1
+0.1
-0.0
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.2
-0.2
+0.5
-0.0
+0.2
stress
R2A with Zinc chloride 2560 uM
+0.1
+0.3
-0.3
+0.3
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
+0.4
+0.2
-0.1
+0.0
no stress control
no stress control
+0.1
+0.1
+0.0
+0.1
+0.1
no stress control
no stress control
+0.1
-0.0
+0.4
-0.1
+0.1
pH
R2A_PIPES pH 4.5
-0.0
+0.5
+0.1
-0.2
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
+0.2
+0.4
-0.2
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.0
-0.0
+0.4
+0.1
+0.1
stress
R2A with Zinc chloride 2560 uM
+0.2
+0.3
+0.0
+0.0
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.3
+0.2
+0.6
-0.0
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
+0.3
+0.0
+0.4
-0.1
+0.1
no stress control
no stress control
-0.1
+0.5
+0.4
-0.2
+0.1
no stress control
no stress control
-0.0
-0.0
+0.5
+0.0
+0.3
pH
R2A_PIPES pH 4.5
-0.1
+0.5
+0.3
-0.0
+0.1
no stress control
no stress control
+0.1
+0.0
+0.5
-0.0
+0.3
no stress control
no stress control
+0.2
+0.2
+0.2
+0.1
+0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.3
+0.4
+0.2
+0.0
+0.1
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