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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS19550 and LRK55_RS19555 are separated by 93 nucleotides
LRK55_RS19555 and LRK55_RS19560 are separated by 98 nucleotides
LRK55_RS19560 and LRK55_RS19565 are separated by 57 nucleotides
LRK55_RS19565 and LRK55_RS19570 are separated by 392 nucleotides
LRK55_RS19550: LRK55_RS19550 - hypothetical protein, at 245,430 to 245,906
_RS19550
LRK55_RS19555: LRK55_RS19555 - hypothetical protein, at 246,000 to 246,374
_RS19555
LRK55_RS19560: LRK55_RS19560 - hypothetical protein, at 246,473 to 246,922
_RS19560
LRK55_RS19565: LRK55_RS19565 - hypothetical protein, at 246,980 to 247,183
_RS19565
LRK55_RS19570: LRK55_RS19570 - hypothetical protein, at 247,576 to 247,890
_RS19570
Group
Condition
LRK55
_RS19550
LRK55
_RS19555
LRK55
_RS19560
LRK55
_RS19565
LRK55
_RS19570
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
-0.2
-0.1
-0.1
+0.0
stress
R2A with Zinc chloride 2560 uM
-0.1
+0.7
-0.3
+0.1
-0.8
pH
R2A_PIPES pH 4.5
+0.2
-0.1
-0.1
+0.0
-0.3
stress
R2A with Zinc chloride 2560 uM
-0.1
+0.4
-0.5
+0.0
-0.1
no stress control
no stress control
-0.3
+0.3
-0.2
+0.0
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.1
-0.1
+0.2
+0.0
no stress control
no stress control
-0.0
-0.4
+0.1
+0.2
+0.3
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
+0.2
-0.0
+0.0
+0.0
pH
R2A_PIPES pH 4.25
-0.6
+0.2
-0.1
+0.1
+0.9
no stress control
no stress control
+0.0
+0.0
+0.1
+0.2
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
+0.5
+0.1
+0.2
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
+1.0
-0.3
+0.2
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.5
+0.2
+0.1
+0.6
-0.4
pH
R2A_PIPES pH 4.5
-0.1
+0.7
+0.1
+0.2
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.3
+0.0
+0.4
+0.7
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
+0.5
+0.5
-0.1
-0.0
stress
R2A with Nickel (II) chloride 1696 uM
+0.3
+0.7
-0.3
+0.2
+0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.0
+0.8
+0.1
+0.5
+0.0
no stress control
no stress control
+0.2
+0.8
-0.1
+0.4
+0.5
pH
R2A_PIPES pH 4.25
+0.3
+1.2
-0.6
+0.3
+0.6
no stress control
no stress control
-0.0
+1.1
+0.2
+0.5
+0.4
no stress control
no stress control
+0.3
+1.2
+0.3
+0.6
+0.3
no stress control
no stress control
+0.3
+1.1
+0.4
+0.6
+0.6
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LRK55_RS19560
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