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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS19405 and LRK55_RS19410 overlap by 4 nucleotides
LRK55_RS19410 and LRK55_RS19415 are separated by 176 nucleotides
LRK55_RS19415 and LRK55_RS19420 are separated by 68 nucleotides
LRK55_RS19420 and LRK55_RS19425 are separated by 36 nucleotides
LRK55_RS19405: LRK55_RS19405 - RES family NAD+ phosphorylase, at 226,691 to 227,164
_RS19405
LRK55_RS19410: LRK55_RS19410 - DUF2384 domain-containing protein, at 227,161 to 227,754
_RS19410
LRK55_RS19415: LRK55_RS19415 - hypothetical protein, at 227,931 to 228,194
_RS19415
LRK55_RS19420: LRK55_RS19420 - hypothetical protein, at 228,263 to 228,469
_RS19420
LRK55_RS19425: LRK55_RS19425 - hypothetical protein, at 228,506 to 228,769
_RS19425
Group
Condition
LRK55
_RS19405
LRK55
_RS19410
LRK55
_RS19415
LRK55
_RS19420
LRK55
_RS19425
no stress control
no stress control
-0.3
N.D.
-1.0
+0.0
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
N.D.
-0.5
-0.1
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
N.D.
-0.8
+0.3
-0.5
no stress control
no stress control
-0.6
N.D.
-0.5
+0.3
-0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.3
N.D.
-0.8
+0.0
-0.3
no stress control
no stress control
-0.2
N.D.
-1.0
+0.1
+0.3
pH
R2A_PIPES pH 4.25
+0.1
N.D.
+0.6
-0.4
-1.0
no stress control
no stress control
+0.4
N.D.
-1.2
+0.0
+0.1
stress
R2A with Zinc chloride 2560 uM
-0.6
N.D.
-0.2
+0.1
+0.2
stress
R2A with Zinc chloride 2560 uM
+0.0
N.D.
-0.2
-0.1
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.5
N.D.
-0.6
+0.5
+0.3
no stress control
no stress control
+0.1
N.D.
-0.2
-0.0
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
N.D.
-0.2
+0.3
-0.1
no stress control
no stress control
-0.2
N.D.
-0.1
+0.3
-0.2
pH
R2A_PIPES pH 4.25
-0.7
N.D.
+0.2
+0.2
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
N.D.
-0.2
-0.0
+0.4
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.4
N.D.
+0.1
+0.3
+0.0
no stress control
no stress control
+0.1
N.D.
-0.0
+0.0
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
N.D.
+0.2
+0.2
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.0
N.D.
+0.0
+0.2
+0.3
stress
R2A with Nickel (II) chloride 1696 uM
+0.7
N.D.
+0.2
+0.2
-0.4
pH
R2A_PIPES pH 4.5
+0.5
N.D.
-0.1
+0.1
+0.3
pH
R2A_PIPES pH 4.5
+0.7
N.D.
+0.2
+0.3
+0.6
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