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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS19260 and LRK55_RS19265 are separated by 67 nucleotides
LRK55_RS19265 and LRK55_RS19270 are separated by 15 nucleotides
LRK55_RS19270 and LRK55_RS19275 are separated by 85 nucleotides
LRK55_RS19275 and LRK55_RS19280 are separated by 1 nucleotides
LRK55_RS19260: LRK55_RS19260 - type IV secretion system protein TraC, at 196,896 to 199,325
_RS19260
LRK55_RS19265: LRK55_RS19265 - TraA family conjugative transfer protein, at 199,393 to 199,773
_RS19265
LRK55_RS19270: LRK55_RS19270 - TraV family lipoprotein, at 199,789 to 200,547
_RS19270
LRK55_RS19275: LRK55_RS19275 - TraB/VirB10 family protein, at 200,633 to 201,913
_RS19275
LRK55_RS19280: LRK55_RS19280 - type-F conjugative transfer system secretin TraK, at 201,915 to 202,901
_RS19280
Group
Condition
LRK55
_RS19260
LRK55
_RS19265
LRK55
_RS19270
LRK55
_RS19275
LRK55
_RS19280
pH
R2A_PIPES pH 4.25
-0.1
-1.0
+0.3
-0.6
-0.7
pH
R2A_PIPES pH 4.25
-0.8
-0.6
+0.0
-0.2
-0.5
no stress control
no stress control
-0.0
-0.4
-0.4
-0.3
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.4
+0.2
-0.5
-0.1
-0.2
no stress control
no stress control
-0.1
-0.5
-0.4
+0.0
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.0
-0.6
-0.6
-0.2
+0.5
pH
R2A_PIPES pH 4.5
-0.1
-0.6
+0.1
-0.1
-0.1
no stress control
no stress control
+0.1
-0.2
-0.9
-0.1
+0.3
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-0.7
-0.0
-0.1
+0.1
pH
R2A_PIPES pH 4.5
+0.0
-0.4
-0.0
-0.0
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.3
-0.2
+0.1
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.2
-0.2
+0.1
-0.0
no stress control
no stress control
+0.2
-0.2
-0.3
-0.1
+0.1
no stress control
no stress control
+0.1
+0.0
-0.2
-0.1
+0.1
stress
R2A with Zinc chloride 2560 uM
+0.0
-0.6
+0.3
+0.3
+0.1
no stress control
no stress control
+0.2
-0.2
+0.1
-0.1
+0.4
stress
R2A with Zinc chloride 2560 uM
+0.2
-0.1
+0.2
+0.2
-0.1
no stress control
no stress control
+0.1
+0.1
-0.1
-0.0
+0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.1
-0.1
+0.1
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
-0.4
+0.5
+0.1
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
-0.2
+0.2
+0.4
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
+0.3
+0.0
+0.2
-0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.3
+0.2
+0.0
-0.1
+0.2
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