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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS19160 and LRK55_RS19165 are separated by 1 nucleotides
LRK55_RS19165 and LRK55_RS19170 are separated by 196 nucleotides
LRK55_RS19170 and LRK55_RS19175 are separated by 430 nucleotides
LRK55_RS19175 and LRK55_RS19180 are separated by 236 nucleotides
LRK55_RS19160: LRK55_RS19160 - hypothetical protein, at 176,371 to 176,547
_RS19160
LRK55_RS19165: LRK55_RS19165 - hypothetical protein, at 176,549 to 177,049
_RS19165
LRK55_RS19170: LRK55_RS19170 - tyrosine-type recombinase/integrase, at 177,246 to 178,355
_RS19170
LRK55_RS19175: LRK55_RS19175 - hypothetical protein, at 178,786 to 179,403
_RS19175
LRK55_RS19180: LRK55_RS19180 - hemerythrin domain-containing protein, at 179,640 to 180,044
_RS19180
Group
Condition
LRK55
_RS19160
LRK55
_RS19165
LRK55
_RS19170
LRK55
_RS19175
LRK55
_RS19180
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.8
+0.1
-0.6
-0.1
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.7
-0.0
-0.2
-0.1
-0.2
no stress control
no stress control
-0.7
+0.2
-0.4
-0.1
-0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.7
+0.1
-0.3
-0.1
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.0
+0.3
+0.0
-0.1
-0.3
pH
R2A_PIPES pH 4.25
-0.9
-0.1
+0.1
+0.1
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.6
+0.1
-0.3
-0.0
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.8
+0.4
-0.2
-0.0
-0.0
no stress control
no stress control
+0.1
+0.0
-0.2
-0.1
-0.3
pH
R2A_PIPES pH 4.25
+0.0
+0.1
+0.0
+0.1
-0.6
stress
R2A with Zinc chloride 2560 uM
+0.1
-0.1
-0.2
-0.1
+0.1
pH
R2A_PIPES pH 4.5
-0.3
+0.2
-0.1
+0.1
-0.0
stress
R2A with Zinc chloride 2560 uM
+0.4
+0.4
-0.6
-0.1
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.6
+0.1
-0.3
-0.1
-0.3
no stress control
no stress control
+0.3
+0.1
-0.3
+0.0
-0.1
no stress control
no stress control
+0.1
+0.1
-0.1
+0.0
+0.1
no stress control
no stress control
+0.2
+0.1
-0.2
-0.0
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.4
+0.3
-0.5
-0.0
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
+0.6
+0.1
-0.0
+0.0
-0.2
no stress control
no stress control
+0.1
+0.2
-0.0
+0.1
+0.3
no stress control
no stress control
+0.5
+0.1
+0.1
-0.0
+0.0
pH
R2A_PIPES pH 4.5
+0.9
+0.2
+0.1
+0.2
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+1.5
+0.3
-0.3
+0.4
-0.2
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