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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS19085 and LRK55_RS19090 are separated by 74 nucleotides
LRK55_RS19090 and LRK55_RS19095 are separated by 84 nucleotides
LRK55_RS19095 and LRK55_RS19100 are separated by 25 nucleotides
LRK55_RS19100 and LRK55_RS19105 are separated by 8 nucleotides
LRK55_RS19085: LRK55_RS19085 - GtrA family protein, at 156,111 to 156,527
_RS19085
LRK55_RS19090: LRK55_RS19090 - MFS transporter, at 156,602 to 157,783
_RS19090
LRK55_RS19095: LRK55_RS19095 - HAMP domain-containing sensor histidine kinase, at 157,868 to 159,076
_RS19095
LRK55_RS19100: LRK55_RS19100 - response regulator transcription factor, at 159,102 to 159,779
_RS19100
LRK55_RS19105: LRK55_RS19105 - efflux RND transporter permease subunit, at 159,788 to 162,922
_RS19105
Group
Condition
LRK55
_RS19085
LRK55
_RS19090
LRK55
_RS19095
LRK55
_RS19100
LRK55
_RS19105
pH
R2A_PIPES pH 4.25
-1.8
-0.3
-2.7
-0.8
-0.0
stress
R2A with Zinc chloride 2560 uM
-0.5
-0.4
-3.0
-0.5
-0.2
pH
R2A_PIPES pH 4.25
-0.9
-0.3
-2.8
-0.4
-0.2
stress
R2A with Zinc chloride 2560 uM
-0.4
-0.1
-2.7
-0.1
-0.2
pH
R2A_PIPES pH 4.5
-0.7
-0.2
-1.4
-0.8
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.6
-0.6
-2.5
+0.9
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.0
-0.2
-2.1
-0.2
+0.0
pH
R2A_PIPES pH 4.5
-0.6
-0.0
-1.4
-0.5
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.5
+0.0
-1.0
-0.7
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.6
-0.5
-0.8
-0.2
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.4
-0.4
-1.5
+0.2
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.2
-1.1
-0.5
-0.1
no stress control
no stress control
-0.4
-0.2
-0.5
-0.6
-0.1
no stress control
no stress control
-0.4
-0.6
-0.5
-0.1
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
-0.1
-1.0
-0.3
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
-0.4
-0.8
+0.2
+0.0
no stress control
no stress control
-0.2
-0.3
-0.4
-0.3
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.3
-0.1
-0.7
-0.3
+0.1
no stress control
no stress control
-0.1
-0.4
-0.5
-0.1
-0.1
no stress control
no stress control
-0.3
-0.2
-0.5
-0.1
-0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-0.1
-0.6
+0.0
-0.1
no stress control
no stress control
+0.0
-0.4
-0.5
+0.2
-0.3
no stress control
no stress control
-0.1
-0.1
-0.4
-0.4
-0.1
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