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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS19050 and LRK55_RS19055 are separated by 69 nucleotides
LRK55_RS19055 and LRK55_RS19060 are separated by 150 nucleotides
LRK55_RS19060 and LRK55_RS19065 are separated by 167 nucleotides
LRK55_RS19065 and LRK55_RS19070 overlap by 4 nucleotides
LRK55_RS19050: LRK55_RS19050 - hypothetical protein, at 148,240 to 148,452
_RS19050
LRK55_RS19055: LRK55_RS19055 - hypothetical protein, at 148,522 to 150,288
_RS19055
LRK55_RS19060: LRK55_RS19060 - DNA-binding protein, at 150,439 to 151,425
_RS19060
LRK55_RS19065: LRK55_RS19065 - site-specific integrase, at 151,593 to 152,756
_RS19065
LRK55_RS19070: LRK55_RS19070 - hypothetical protein, at 152,753 to 153,061
_RS19070
Group
Condition
LRK55
_RS19050
LRK55
_RS19055
LRK55
_RS19060
LRK55
_RS19065
LRK55
_RS19070
no stress control
no stress control
-0.8
+0.1
-0.2
-0.2
-0.2
pH
R2A_PIPES pH 4.25
-0.5
-0.1
-0.5
+0.0
-0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-0.2
-0.2
-0.1
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
-0.2
-0.2
-0.1
-0.3
stress
R2A with Nickel (II) chloride 1696 uM
-0.5
+0.2
-0.2
-0.2
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.4
-0.1
-0.1
-0.1
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.3
-0.2
-0.4
-0.2
-0.3
pH
R2A_PIPES pH 4.25
+0.5
-0.0
-0.5
-0.4
-0.3
stress
R2A with Zinc chloride 2560 uM
+0.2
+0.0
-0.3
-0.3
-0.3
no stress control
no stress control
-0.2
-0.1
-0.1
-0.1
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.1
-0.4
-0.0
-0.1
no stress control
no stress control
+0.2
-0.2
-0.1
-0.0
-0.2
no stress control
no stress control
+0.5
-0.2
-0.3
-0.1
-0.2
no stress control
no stress control
+0.3
-0.1
-0.1
-0.1
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
+0.3
-0.1
-0.2
-0.1
-0.0
pH
R2A_PIPES pH 4.5
-0.0
+0.1
-0.1
-0.1
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.5
+0.1
-0.2
-0.2
-0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.8
-0.1
-0.2
-0.1
-0.2
stress
R2A with Zinc chloride 2560 uM
+0.9
-0.0
-0.2
-0.2
-0.1
no stress control
no stress control
+0.9
-0.0
-0.0
-0.1
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.4
-0.1
+0.2
+0.0
+0.1
pH
R2A_PIPES pH 4.5
+1.2
+0.0
-0.2
-0.1
-0.3
no stress control
no stress control
+1.7
+0.0
-0.4
-0.1
-0.2
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LRK55_RS19060
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