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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS18620 and LRK55_RS18625 are separated by 562 nucleotides
LRK55_RS18625 and LRK55_RS18630 are separated by 35 nucleotides
LRK55_RS18630 and LRK55_RS18635 are separated by 200 nucleotides
LRK55_RS18635 and LRK55_RS18640 are separated by 47 nucleotides
LRK55_RS18620: LRK55_RS18620 - DUF3761 domain-containing protein, at 59,044 to 59,652
_RS18620
LRK55_RS18625: LRK55_RS18625 - hypothetical protein, at 60,215 to 60,817
_RS18625
LRK55_RS18630: LRK55_RS18630 - SOS response-associated peptidase, at 60,853 to 61,527
_RS18630
LRK55_RS18635: LRK55_RS18635 - Tn3 family transposase, at 61,728 to 64,697
_RS18635
LRK55_RS18640: LRK55_RS18640 - DUF3147 family protein, at 64,745 to 65,095
_RS18640
Group
Condition
LRK55
_RS18620
LRK55
_RS18625
LRK55
_RS18630
LRK55
_RS18635
LRK55
_RS18640
pH
R2A_PIPES pH 4.25
-0.6
-0.5
-0.2
-0.4
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
+0.0
-0.1
-0.1
-0.2
no stress control
no stress control
+0.1
-0.1
-0.3
-0.3
-0.2
stress
R2A with Zinc chloride 2560 uM
-0.1
+0.1
+0.1
-0.2
-0.6
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-0.3
+0.0
-0.1
-0.1
no stress control
no stress control
-0.3
+0.0
-0.1
-0.1
-0.1
pH
R2A_PIPES pH 4.5
+0.0
-0.1
+0.0
-0.3
-0.1
stress
R2A with Zinc chloride 2560 uM
+0.1
+0.1
-0.0
-0.1
-0.4
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
+0.0
-0.1
-0.2
-0.1
no stress control
no stress control
-0.2
+0.1
+0.0
-0.1
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-0.1
+0.0
-0.3
+0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.0
+0.1
+0.1
-0.2
-0.3
no stress control
no stress control
+0.1
+0.1
-0.0
-0.2
-0.1
no stress control
no stress control
-0.1
+0.2
-0.1
-0.0
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
+0.2
-0.0
-0.2
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.0
+0.0
-0.2
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
+0.2
+0.2
-0.0
-0.2
pH
R2A_PIPES pH 4.25
+0.2
-0.1
+0.1
-0.4
+0.3
pH
R2A_PIPES pH 4.5
+0.0
+0.0
+0.2
-0.1
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.3
+0.0
+0.2
-0.1
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
+0.1
+0.2
-0.0
+0.1
no stress control
no stress control
+0.1
+0.2
+0.0
-0.0
+0.0
no stress control
no stress control
+0.3
+0.1
+0.1
-0.0
-0.0
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