Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS18045 and LRK55_RS18050 are separated by 61 nucleotidesLRK55_RS18050 and LRK55_RS18055 are separated by 39 nucleotidesLRK55_RS18055 and LRK55_RS18060 are separated by 224 nucleotidesLRK55_RS18060 and LRK55_RS18065 are separated by 2 nucleotides LRK55_RS18045: LRK55_RS18045 - acetyl-CoA C-acyltransferase, at 3,913,606 to 3,914,811 _RS18045 LRK55_RS18050: LRK55_RS18050 - 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein, at 3,914,873 to 3,917,260 _RS18050 LRK55_RS18055: LRK55_RS18055 - TetR/AcrR family transcriptional regulator, at 3,917,300 to 3,917,926 _RS18055 LRK55_RS18060: LRK55_RS18060 - nucleoside-diphosphate kinase, at 3,918,151 to 3,918,576 _RS18060 LRK55_RS18065: LRK55_RS18065 - 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN, at 3,918,579 to 3,919,709 _RS18065
Group Condition LRK55_RS18045 LRK55_RS18050 LRK55_RS18055 LRK55_RS18060 LRK55_RS18065
stress R2A_PIPES with Cadmium chloride 64 uM -0.1 -0.4 +0.9 N.D. -0.7
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.1 +0.1 +0.1 N.D. -0.4
no stress control no stress control +0.2 +0.1 +0.2 N.D. -0.5
no stress control no stress control +0.1 +0.0 +0.3 N.D. -0.4
no stress control no stress control -0.1 +0.1 +0.3 N.D. -0.2
stress R2A_PIPES with Cadmium chloride 64 uM +0.0 -0.2 +0.8 N.D. -0.5
no stress control no stress control +0.0 +0.2 +0.4 N.D. -0.4
stress R2A with Nickel (II) chloride 1696 uM +0.3 +0.0 +0.3 N.D. -0.4
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.3 +0.1 +0.3 N.D. -0.4
no stress control no stress control +0.1 +0.0 +0.4 N.D. -0.2
pH R2A_PIPES pH 4.5 +0.4 +0.1 +0.5 N.D. -0.6
no stress control no stress control +0.1 +0.2 +0.2 N.D. -0.1
stress R2A with Nickel (II) chloride 1696 uM +0.3 -0.0 +0.6 N.D. -0.3
no stress control no stress control +0.1 +0.2 +0.3 N.D. -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 +0.3 +0.4 N.D. -0.3
pH R2A_PIPES pH 4.5 +0.4 +0.1 +0.7 N.D. -0.5
stress R2A with Zinc chloride 2560 uM +0.2 -0.0 +0.9 N.D. -0.3
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.3 +0.0 +0.4 N.D. +0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.3 +0.2 +0.8 N.D. -0.3
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.3 +0.1 +0.4 N.D. +0.2
pH R2A_PIPES pH 4.25 +0.1 -0.0 +1.7 N.D. -0.7
stress R2A with Zinc chloride 2560 uM +0.3 +0.1 +0.9 N.D. -0.2
pH R2A_PIPES pH 4.25 +0.3 +0.1 +1.6 N.D. -0.5
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