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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS17825 and LRK55_RS17830 are separated by 154 nucleotides
LRK55_RS17830 and LRK55_RS17835 are separated by 133 nucleotides
LRK55_RS17835 and LRK55_RS17840 are separated by 51 nucleotides
LRK55_RS17840 and LRK55_RS17845 are separated by 41 nucleotides
LRK55_RS17825: LRK55_RS17825 - nucleotide exchange factor GrpE, at 3,868,629 to 3,869,162
_RS17825
LRK55_RS17830: LRK55_RS17830 - molecular chaperone DnaK, at 3,869,317 to 3,871,236
_RS17830
LRK55_RS17835: LRK55_RS17835 - molecular chaperone DnaJ, at 3,871,370 to 3,872,500
_RS17835
LRK55_RS17840: LRK55_RS17840 - 4-hydroxy-tetrahydrodipicolinate reductase, at 3,872,552 to 3,873,352
_RS17840
LRK55_RS17845: LRK55_RS17845 - 2OG-Fe(II) oxygenase, at 3,873,394 to 3,874,089
_RS17845
Group
Condition
LRK55
_RS17825
LRK55
_RS17830
LRK55
_RS17835
LRK55
_RS17840
LRK55
_RS17845
pH
R2A_PIPES pH 4.25
N.D.
N.D.
-2.6
N.D.
-0.9
pH
R2A_PIPES pH 4.25
N.D.
N.D.
-2.6
N.D.
-0.9
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
-3.2
N.D.
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
-3.2
N.D.
+0.0
no stress control
no stress control
N.D.
N.D.
-3.3
N.D.
+0.1
no stress control
no stress control
N.D.
N.D.
-3.2
N.D.
+0.1
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
-3.2
N.D.
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
-3.1
N.D.
+0.0
no stress control
no stress control
N.D.
N.D.
-3.2
N.D.
+0.1
no stress control
no stress control
N.D.
N.D.
-3.0
N.D.
-0.0
pH
R2A_PIPES pH 4.5
N.D.
N.D.
-2.7
N.D.
-0.2
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
-3.0
N.D.
+0.1
no stress control
no stress control
N.D.
N.D.
-3.0
N.D.
+0.1
no stress control
no stress control
N.D.
N.D.
-2.9
N.D.
-0.0
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
-3.0
N.D.
+0.2
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
-2.7
N.D.
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
-2.8
N.D.
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
-2.9
N.D.
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
-3.0
N.D.
+0.3
pH
R2A_PIPES pH 4.5
N.D.
N.D.
-2.8
N.D.
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
-2.8
N.D.
+0.2
no stress control
no stress control
N.D.
N.D.
-2.5
N.D.
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
-2.1
N.D.
+0.1
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