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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS17730 and LRK55_RS17735 are separated by 296 nucleotides
LRK55_RS17735 and LRK55_RS17740 are separated by 126 nucleotides
LRK55_RS17740 and LRK55_RS17745 are separated by 96 nucleotides
LRK55_RS17745 and LRK55_RS17750 are separated by 336 nucleotides
LRK55_RS17730: LRK55_RS17730 - tRNA-Leu, at 3,852,227 to 3,852,311
_RS17730
LRK55_RS17735: LRK55_RS17735 - hypothetical protein, at 3,852,608 to 3,852,868
_RS17735
LRK55_RS17740: LRK55_RS17740 - response regulator, at 3,852,995 to 3,853,648
_RS17740
LRK55_RS17745: LRK55_RS17745 - Rne/Rng family ribonuclease, at 3,853,745 to 3,856,897
_RS17745
LRK55_RS17750: LRK55_RS17750 - RluA family pseudouridine synthase, at 3,857,234 to 3,858,232
_RS17750
Group
Condition
LRK55
_RS17730
LRK55
_RS17735
LRK55
_RS17740
LRK55
_RS17745
LRK55
_RS17750
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-0.7
-2.3
+0.4
-2.7
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
+0.3
-3.1
+0.2
-2.7
pH
R2A_PIPES pH 4.25
N.D.
-0.1
-3.0
+0.6
-1.7
pH
R2A_PIPES pH 4.5
N.D.
-0.4
-1.7
-0.3
-1.5
pH
R2A_PIPES pH 4.25
N.D.
-0.1
-3.3
+1.2
-1.5
pH
R2A_PIPES pH 4.5
N.D.
+0.1
-2.0
-0.6
-1.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.3
-2.4
+0.2
-1.6
stress
R2A with Zinc chloride 2560 uM
N.D.
-0.2
-1.3
-0.5
-1.0
stress
R2A with Zinc chloride 2560 uM
N.D.
+0.1
-1.7
-0.6
-0.8
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.5
-2.0
+0.2
-1.5
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.1
-1.0
-0.3
-1.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
+0.1
-1.3
-0.1
-1.5
no stress control
no stress control
N.D.
-0.0
-1.5
+0.1
-1.2
no stress control
no stress control
N.D.
-0.4
-1.0
+0.3
-1.5
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
+0.1
-1.3
-0.3
-1.0
no stress control
no stress control
N.D.
-0.0
-1.0
+0.2
-1.6
no stress control
no stress control
N.D.
+0.2
-1.5
-0.0
-1.1
no stress control
no stress control
N.D.
+0.3
-1.2
-0.0
-1.4
no stress control
no stress control
N.D.
+0.3
-1.4
+0.3
-1.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
+0.6
-1.4
+0.1
-1.1
no stress control
no stress control
N.D.
+0.5
-1.4
+0.5
-1.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.0
-0.7
-0.1
-0.7
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.2
-1.3
+0.1
-0.4
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