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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS17610 and LRK55_RS17615 are separated by 283 nucleotides
LRK55_RS17615 and LRK55_RS17620 are separated by 622 nucleotides
LRK55_RS17620 and LRK55_RS17625 are separated by 612 nucleotides
LRK55_RS17625 and LRK55_RS17630 are separated by 160 nucleotides
LRK55_RS17610: LRK55_RS17610 - Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB, at 3,823,209 to 3,824,486
_RS17610
LRK55_RS17615: LRK55_RS17615 - low molecular weight protein-tyrosine-phosphatase, at 3,824,770 to 3,825,204
_RS17615
LRK55_RS17620: LRK55_RS17620 - UDP-glucose 4-epimerase GalE, at 3,825,827 to 3,826,834
_RS17620
LRK55_RS17625: LRK55_RS17625 - divalent metal cation transporter, at 3,827,447 to 3,828,733
_RS17625
LRK55_RS17630: LRK55_RS17630 - phosphoketolase family protein, at 3,828,894 to 3,831,296
_RS17630
Group
Condition
LRK55
_RS17610
LRK55
_RS17615
LRK55
_RS17620
LRK55
_RS17625
LRK55
_RS17630
pH
R2A_PIPES pH 4.25
+0.2
-1.0
-0.1
-0.2
+0.2
stress
R2A with Zinc chloride 2560 uM
+0.0
-0.3
-0.3
-0.1
+0.2
stress
R2A with Zinc chloride 2560 uM
+0.2
-0.4
-0.3
-0.1
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.1
-0.3
-0.1
-0.1
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.1
-0.4
-0.1
-0.1
+0.3
no stress control
no stress control
+0.1
-0.3
-0.2
-0.0
+0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
-0.2
-0.2
-0.0
+0.1
no stress control
no stress control
-0.1
-0.2
-0.1
+0.2
+0.0
no stress control
no stress control
+0.0
-0.4
+0.1
+0.0
+0.1
no stress control
no stress control
+0.1
-0.3
-0.1
+0.1
+0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.0
-0.1
-0.0
+0.1
-0.0
pH
R2A_PIPES pH 4.25
+0.2
-0.3
-0.6
+0.2
+0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.0
-0.1
+0.0
+0.2
-0.0
pH
R2A_PIPES pH 4.5
+0.1
-0.1
-0.1
+0.1
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
+0.0
-0.2
+0.0
+0.3
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.2
+0.1
+0.0
+0.3
no stress control
no stress control
+0.1
+0.0
+0.1
-0.1
+0.1
no stress control
no stress control
+0.1
-0.2
+0.1
+0.3
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-0.3
+0.1
+0.3
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
-0.1
+0.0
+0.2
+0.3
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
+0.0
+0.1
+0.1
+0.2
no stress control
no stress control
+0.2
-0.1
+0.2
+0.2
+0.2
pH
R2A_PIPES pH 4.5
+0.3
-0.0
-0.1
+0.3
+0.3
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