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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS17320 and LRK55_RS17325 are separated by 134 nucleotides
LRK55_RS17325 and LRK55_RS17330 overlap by 4 nucleotides
LRK55_RS17330 and LRK55_RS17335 overlap by 1 nucleotides
LRK55_RS17335 and LRK55_RS17340 overlap by 4 nucleotides
LRK55_RS17320: LRK55_RS17320 - cation transporter, at 3,758,344 to 3,758,964
_RS17320
LRK55_RS17325: LRK55_RS17325 - P-II family nitrogen regulator, at 3,759,099 to 3,759,428
_RS17325
LRK55_RS17330: LRK55_RS17330 - CusA/CzcA family heavy metal efflux RND transporter, at 3,759,425 to 3,762,559
_RS17330
LRK55_RS17335: LRK55_RS17335 - efflux RND transporter periplasmic adaptor subunit, at 3,762,559 to 3,763,656
_RS17335
LRK55_RS17340: LRK55_RS17340 - TolC family protein, at 3,763,653 to 3,764,831
_RS17340
Group
Condition
LRK55
_RS17320
LRK55
_RS17325
LRK55
_RS17330
LRK55
_RS17335
LRK55
_RS17340
pH
R2A_PIPES pH 4.25
-0.7
-2.0
-0.8
-0.3
-0.4
pH
R2A_PIPES pH 4.25
-0.6
-1.5
-0.6
-0.3
-0.3
no stress control
no stress control
-0.7
-1.1
-0.2
-0.3
-0.5
pH
R2A_PIPES pH 4.5
-0.7
-0.7
-0.6
-0.3
-0.3
pH
R2A_PIPES pH 4.5
-0.1
-1.3
-0.5
-0.4
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
-0.6
-0.7
-0.6
-0.0
-0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.5
-0.6
-0.5
-0.1
-0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.6
-0.5
-0.4
-0.3
+0.1
no stress control
no stress control
-0.3
-0.6
-0.2
-0.2
-0.4
no stress control
no stress control
-0.2
-0.8
-0.2
-0.1
-0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.8
-0.2
-0.2
+0.0
no stress control
no stress control
-0.3
-0.4
-0.2
-0.3
-0.2
stress
R2A with Zinc chloride 2560 uM
+0.4
+0.0
-0.6
-0.6
-0.4
no stress control
no stress control
-0.1
-0.8
-0.2
-0.1
+0.1
stress
R2A with Zinc chloride 2560 uM
-0.4
+0.0
-0.5
-0.0
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-0.7
-0.1
+0.0
-0.1
no stress control
no stress control
+0.1
-0.6
-0.2
+0.1
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
-0.3
-0.2
-0.1
+0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
-0.1
-0.1
+0.1
-0.0
no stress control
no stress control
+0.0
-0.5
-0.0
+0.1
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.4
+0.2
-0.1
+0.2
-0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.4
-0.2
+0.0
+0.9
+0.5
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
-0.4
+0.5
+0.5
+0.6
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