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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS17145 and LRK55_RS17150 overlap by 4 nucleotides
LRK55_RS17150 and LRK55_RS17155 are separated by 183 nucleotides
LRK55_RS17155 and LRK55_RS17160 are separated by 1 nucleotides
LRK55_RS17160 and LRK55_RS17165 are separated by 111 nucleotides
LRK55_RS17145: LRK55_RS17145 - multidrug transporter, at 3,721,846 to 3,722,916
_RS17145
LRK55_RS17150: LRK55_RS17150 - TolC family protein, at 3,722,913 to 3,724,304
_RS17150
LRK55_RS17155: LRK55_RS17155 - heavy metal sensor histidine kinase, at 3,724,488 to 3,725,924
_RS17155
LRK55_RS17160: LRK55_RS17160 - heavy metal response regulator transcription factor, at 3,725,926 to 3,726,600
_RS17160
LRK55_RS17165: LRK55_RS17165 - DUF2127 domain-containing protein, at 3,726,712 to 3,727,266
_RS17165
Group
Condition
LRK55
_RS17145
LRK55
_RS17150
LRK55
_RS17155
LRK55
_RS17160
LRK55
_RS17165
pH
R2A_PIPES pH 4.25
-0.5
-0.4
-0.4
+0.3
-0.5
stress
R2A with Nickel (II) chloride 1696 uM
-0.4
-0.2
-0.4
-0.3
-0.2
pH
R2A_PIPES pH 4.5
-0.5
+0.0
-0.4
+0.0
-0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.1
-0.1
-0.4
-0.1
no stress control
no stress control
-0.2
+0.1
-0.3
-0.3
-0.0
pH
R2A_PIPES pH 4.5
-0.1
+0.1
-0.3
-0.0
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-0.2
-0.3
+0.2
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.5
-0.0
-0.1
+0.1
+0.0
no stress control
no stress control
-0.3
+0.2
-0.3
+0.3
-0.2
no stress control
no stress control
-0.0
-0.1
-0.1
-0.2
+0.1
no stress control
no stress control
+0.1
-0.2
-0.0
-0.1
-0.1
stress
R2A with Zinc chloride 2560 uM
+0.1
-0.0
+0.2
-0.7
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
+0.1
-0.2
+0.1
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.3
-0.4
-0.3
+0.4
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.2
-0.0
-0.0
+0.1
+0.1
no stress control
no stress control
-0.1
+0.2
-0.1
+0.2
-0.2
no stress control
no stress control
+0.0
-0.0
-0.1
+0.0
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
+0.1
-0.2
+0.3
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.0
+0.1
-0.0
+0.0
+0.0
no stress control
no stress control
-0.5
+0.2
+0.2
+0.3
-0.1
pH
R2A_PIPES pH 4.25
-0.1
+0.2
+0.3
+0.3
-0.3
stress
R2A with Zinc chloride 2560 uM
+0.1
+0.2
-0.2
+0.4
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
-0.1
+0.0
+0.5
+0.1
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