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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS16645 and LRK55_RS16650 are separated by 13 nucleotides
LRK55_RS16650 and LRK55_RS16655 are separated by 189 nucleotides
LRK55_RS16655 and LRK55_RS16660 are separated by 11 nucleotides
LRK55_RS16660 and LRK55_RS16665 are separated by 162 nucleotides
LRK55_RS16645: LRK55_RS16645 - hypothetical protein, at 3,613,380 to 3,613,874
_RS16645
LRK55_RS16650: LRK55_RS16650 - EAL domain-containing protein, at 3,613,888 to 3,616,455
_RS16650
LRK55_RS16655: LRK55_RS16655 - RNA polymerase sigma factor RpoE, at 3,616,645 to 3,617,259
_RS16655
LRK55_RS16660: LRK55_RS16660 - sigma-E factor negative regulatory protein, at 3,617,271 to 3,617,924
_RS16660
LRK55_RS16665: LRK55_RS16665 - Do family serine endopeptidase, at 3,618,087 to 3,619,559
_RS16665
Group
Condition
LRK55
_RS16645
LRK55
_RS16650
LRK55
_RS16655
LRK55
_RS16660
LRK55
_RS16665
pH
R2A_PIPES pH 4.25
-2.8
-2.5
N.D.
N.D.
-3.6
pH
R2A_PIPES pH 4.25
-2.3
-2.3
N.D.
N.D.
-3.6
stress
R2A_PIPES with Cadmium chloride 64 uM
-2.7
-2.5
N.D.
N.D.
-1.7
stress
R2A with Zinc chloride 2560 uM
-1.9
-1.7
N.D.
N.D.
-2.0
stress
R2A with Zinc chloride 2560 uM
-1.7
-1.5
N.D.
N.D.
-2.0
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.8
-1.9
N.D.
N.D.
-1.4
pH
R2A_PIPES pH 4.5
-1.7
-1.7
N.D.
N.D.
-1.7
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.2
-1.4
N.D.
N.D.
-2.4
pH
R2A_PIPES pH 4.5
-1.7
-1.6
N.D.
N.D.
-1.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.2
-1.6
N.D.
N.D.
-2.1
stress
R2A with Nickel (II) chloride 1696 uM
-1.3
-1.7
N.D.
N.D.
-1.4
stress
R2A with Nickel (II) chloride 1696 uM
-1.5
-1.6
N.D.
N.D.
-1.2
no stress control
no stress control
-1.6
-1.5
N.D.
N.D.
-1.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-1.4
-1.4
N.D.
N.D.
-1.2
no stress control
no stress control
-1.3
-1.6
N.D.
N.D.
-1.1
no stress control
no stress control
-1.4
-1.5
N.D.
N.D.
-1.0
no stress control
no stress control
-1.5
-1.5
N.D.
N.D.
-1.0
no stress control
no stress control
-1.2
-1.5
N.D.
N.D.
-1.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-1.2
-1.2
N.D.
N.D.
-1.2
no stress control
no stress control
-1.3
-1.2
N.D.
N.D.
-1.1
no stress control
no stress control
-1.3
-1.2
N.D.
N.D.
-0.9
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-1.4
-1.1
N.D.
N.D.
-0.8
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-1.1
-1.3
N.D.
N.D.
-0.7
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