Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS16370 and LRK55_RS16375 are separated by 140 nucleotidesLRK55_RS16375 and LRK55_RS16380 are separated by 3 nucleotidesLRK55_RS16380 and LRK55_RS16385 overlap by 1 nucleotidesLRK55_RS16385 and LRK55_RS16390 are separated by 52 nucleotides LRK55_RS16370: LRK55_RS16370 - Smr/MutS family protein, at 3,568,051 to 3,568,596 _RS16370 LRK55_RS16375: LRK55_RS16375 - 5'/3'-nucleotidase SurE, at 3,568,737 to 3,569,534 _RS16375 LRK55_RS16380: LRK55_RS16380 - protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 3,569,538 to 3,570,218 _RS16380 LRK55_RS16385: LRK55_RS16385 - VTT domain-containing protein, at 3,570,218 to 3,570,829 _RS16385 LRK55_RS16390: LRK55_RS16390 - peptidoglycan DD-metalloendopeptidase family protein, at 3,570,882 to 3,571,883 _RS16390
Group Condition LRK55_RS16370 LRK55_RS16375 LRK55_RS16380 LRK55_RS16385 LRK55_RS16390
stress R2A with Zinc chloride 2560 uM +0.1 -2.3 N.D. -4.4 N.D.
stress R2A with Zinc chloride 2560 uM +0.2 -1.5 N.D. -4.4 N.D.
pH R2A_PIPES pH 4.25 -0.9 -0.7 N.D. -3.8 N.D.
pH R2A_PIPES pH 4.25 +0.2 -0.9 N.D. -4.3 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.8 -1.9 N.D. -3.8 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.2 -0.9 N.D. -4.1 N.D.
pH R2A_PIPES pH 4.5 +0.1 -0.5 N.D. -3.9 N.D.
pH R2A_PIPES pH 4.5 -0.1 -0.0 N.D. -4.1 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.2 -0.6 N.D. -3.4 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.2 -0.2 N.D. -3.8 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.0 -0.8 N.D. -3.2 N.D.
stress R2A with Nickel (II) chloride 1696 uM +0.4 -0.3 N.D. -4.0 N.D.
stress R2A with Nickel (II) chloride 1696 uM -0.0 -0.3 N.D. -3.5 N.D.
no stress control no stress control +0.2 -1.3 N.D. -2.7 N.D.
no stress control no stress control +0.1 -0.9 N.D. -3.0 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.8 -0.3 N.D. -4.2 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.5 -0.9 N.D. -3.2 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.4 +0.2 N.D. -4.1 N.D.
no stress control no stress control +0.4 -0.6 N.D. -3.3 N.D.
no stress control no stress control +0.5 -0.8 N.D. -3.1 N.D.
no stress control no stress control +0.4 -0.5 N.D. -3.3 N.D.
no stress control no stress control +0.3 -0.3 N.D. -2.9 N.D.
no stress control no stress control +0.1 -0.0 N.D. -2.4 N.D.
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