Fitness for 5 genes in Rhodanobacter denitrificans MT42

Add gene:

Number of genes on each side:  

Top 23 experiments (either direction), sorted by average fitness

Or view all 23 experiments or choose conditions or try the comparative fitness browser

500 ntLRK55_RS16355 and LRK55_RS16360 overlap by 4 nucleotidesLRK55_RS16360 and LRK55_RS16365 are separated by 105 nucleotidesLRK55_RS16365 and LRK55_RS16370 are separated by 96 nucleotidesLRK55_RS16370 and LRK55_RS16375 are separated by 140 nucleotides LRK55_RS16355: LRK55_RS16355 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 3,564,974 to 3,565,447 _RS16355 LRK55_RS16360: LRK55_RS16360 - magnesium transporter, at 3,565,444 to 3,566,838 _RS16360 LRK55_RS16365: LRK55_RS16365 - tRNA pseudouridine(13) synthase TruD, at 3,566,944 to 3,567,954 _RS16365 LRK55_RS16370: LRK55_RS16370 - Smr/MutS family protein, at 3,568,051 to 3,568,596 _RS16370 LRK55_RS16375: LRK55_RS16375 - 5'/3'-nucleotidase SurE, at 3,568,737 to 3,569,534 _RS16375
Group Condition LRK55_RS16355 LRK55_RS16360 LRK55_RS16365 LRK55_RS16370 LRK55_RS16375
stress R2A with Zinc chloride 2560 uM N.D. -0.2 -0.2 +0.1 -2.3
stress R2A with Zinc chloride 2560 uM N.D. -0.2 -0.6 +0.2 -1.5
stress R2A_PIPES with Cadmium chloride 64 uM N.D. -0.7 -0.1 +0.8 -1.9
no stress control no stress control N.D. -0.1 -0.2 +0.2 -1.3
pH R2A_PIPES pH 4.25 N.D. -0.2 +0.3 -0.9 -0.7
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. -0.1 -0.3 -0.0 -0.8
pH R2A_PIPES pH 4.25 N.D. -0.3 -0.2 +0.2 -0.9
stress R2A_PIPES with Cadmium chloride 64 uM N.D. -0.5 +0.1 +0.2 -0.9
no stress control no stress control N.D. -0.2 -0.3 +0.5 -0.8
stress R2A with Nickel (II) chloride 1696 uM N.D. -0.3 -0.3 -0.0 -0.3
no stress control no stress control N.D. -0.5 +0.4 +0.1 -0.9
pH R2A_PIPES pH 4.5 N.D. -0.1 -0.3 +0.1 -0.5
no stress control no stress control N.D. -0.0 -0.5 +0.4 -0.6
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. -0.0 -0.1 +0.5 -0.9
no stress control no stress control N.D. -0.1 -0.3 +0.4 -0.5
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. +0.2 +0.3 -0.2 -0.6
pH R2A_PIPES pH 4.5 N.D. -0.1 +0.0 -0.1 -0.0
stress R2A with Nickel (II) chloride 1696 uM N.D. -0.1 -0.0 +0.4 -0.3
no stress control no stress control N.D. +0.1 -0.1 +0.3 -0.3
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. +0.3 +0.3 -0.2 -0.2
no stress control no stress control N.D. +0.1 +0.2 +0.1 -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. +1.0 +0.3 +0.8 -0.3
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. +1.6 +0.5 +0.4 +0.2
remove
LRK55_RS16355
plot
remove
LRK55_RS16360
plot
remove
LRK55_RS16365
remove
LRK55_RS16370
plot
remove
LRK55_RS16375
plot