Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS16345 and LRK55_RS16350 overlap by 4 nucleotidesLRK55_RS16350 and LRK55_RS16355 are separated by 10 nucleotidesLRK55_RS16355 and LRK55_RS16360 overlap by 4 nucleotidesLRK55_RS16360 and LRK55_RS16365 are separated by 105 nucleotides LRK55_RS16345: LRK55_RS16345 - cell division protein FtsB, at 3,563,933 to 3,564,268 _RS16345 LRK55_RS16350: LRK55_RS16350 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 3,564,265 to 3,564,963 _RS16350 LRK55_RS16355: LRK55_RS16355 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 3,564,974 to 3,565,447 _RS16355 LRK55_RS16360: LRK55_RS16360 - magnesium transporter, at 3,565,444 to 3,566,838 _RS16360 LRK55_RS16365: LRK55_RS16365 - tRNA pseudouridine(13) synthase TruD, at 3,566,944 to 3,567,954 _RS16365
Group Condition LRK55_RS16345 LRK55_RS16350 LRK55_RS16355 LRK55_RS16360 LRK55_RS16365
stress R2A with Zinc chloride 2560 uM N.D. N.D. N.D. -0.2 -0.6
stress R2A_PIPES with Cadmium chloride 64 uM N.D. N.D. N.D. -0.7 -0.1
no stress control no stress control N.D. N.D. N.D. -0.2 -0.3
stress R2A with Nickel (II) chloride 1696 uM N.D. N.D. N.D. -0.3 -0.3
no stress control no stress control N.D. N.D. N.D. -0.0 -0.5
pH R2A_PIPES pH 4.25 N.D. N.D. N.D. -0.3 -0.2
stress R2A_PIPES with Cadmium chloride 64 uM N.D. N.D. N.D. -0.5 +0.1
no stress control no stress control N.D. N.D. N.D. -0.1 -0.3
pH R2A_PIPES pH 4.5 N.D. N.D. N.D. -0.1 -0.3
stress R2A with Zinc chloride 2560 uM N.D. N.D. N.D. -0.2 -0.2
no stress control no stress control N.D. N.D. N.D. -0.1 -0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. N.D. N.D. -0.1 -0.3
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. N.D. N.D. -0.0 -0.1
no stress control no stress control N.D. N.D. N.D. -0.5 +0.4
stress R2A with Nickel (II) chloride 1696 uM N.D. N.D. N.D. -0.1 -0.0
pH R2A_PIPES pH 4.5 N.D. N.D. N.D. -0.1 +0.0
no stress control no stress control N.D. N.D. N.D. +0.1 -0.1
pH R2A_PIPES pH 4.25 N.D. N.D. N.D. -0.2 +0.3
no stress control no stress control N.D. N.D. N.D. +0.1 +0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. N.D. N.D. +0.2 +0.3
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. N.D. N.D. +0.3 +0.3
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. N.D. N.D. +1.0 +0.3
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. N.D. N.D. +1.6 +0.5
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