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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS16055 and LRK55_RS16060 are separated by 139 nucleotides
LRK55_RS16060 and LRK55_RS16065 are separated by 103 nucleotides
LRK55_RS16065 and LRK55_RS16070 are separated by 74 nucleotides
LRK55_RS16070 and LRK55_RS16075 are separated by 203 nucleotides
LRK55_RS16055: LRK55_RS16055 - nuclear transport factor 2 family protein, at 3,504,926 to 3,505,672
_RS16055
LRK55_RS16060: LRK55_RS16060 - response regulator, at 3,505,812 to 3,506,189
_RS16060
LRK55_RS16065: LRK55_RS16065 - PAS domain-containing sensor histidine kinase, at 3,506,293 to 3,507,600
_RS16065
LRK55_RS16070: LRK55_RS16070 - urocanate hydratase, at 3,507,675 to 3,509,345
_RS16070
LRK55_RS16075: LRK55_RS16075 - AAA family ATPase, at 3,509,549 to 3,511,219
_RS16075
Group
Condition
LRK55
_RS16055
LRK55
_RS16060
LRK55
_RS16065
LRK55
_RS16070
LRK55
_RS16075
pH
R2A_PIPES pH 4.25
-0.5
+0.2
-0.5
-0.5
-0.7
stress
R2A with Zinc chloride 2560 uM
-0.1
-0.1
-0.5
-0.1
-0.6
no stress control
no stress control
-0.2
-0.4
-0.2
-0.2
-0.4
pH
R2A_PIPES pH 4.5
+0.0
-0.2
-0.3
-0.2
-0.6
stress
R2A with Zinc chloride 2560 uM
-0.1
+0.1
-0.3
-0.1
-0.6
no stress control
no stress control
-0.0
-0.1
-0.2
-0.2
-0.5
no stress control
no stress control
-0.1
-0.2
-0.2
-0.1
-0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.0
+0.0
-0.2
-0.3
-0.5
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-0.1
-0.0
-0.0
-0.7
pH
R2A_PIPES pH 4.5
-0.1
+0.1
-0.1
-0.2
-0.6
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.0
+0.3
-0.3
-0.3
-0.6
no stress control
no stress control
-0.1
+0.2
-0.3
-0.2
-0.4
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-0.1
-0.1
-0.1
-0.5
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.2
-0.2
+0.0
-0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
+0.0
-0.2
-0.0
-0.3
no stress control
no stress control
-0.0
+0.1
-0.2
-0.0
-0.3
no stress control
no stress control
+0.0
-0.1
+0.2
-0.1
-0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.3
-0.1
-0.1
-0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.0
+0.0
+0.1
-0.1
-0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.0
+0.1
+0.0
-0.4
pH
R2A_PIPES pH 4.25
+0.0
+0.4
-0.0
+0.1
-0.6
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
+0.3
+0.1
-0.0
-0.2
no stress control
no stress control
+0.0
+0.3
+0.2
+0.1
-0.2
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