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Protein
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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS16025 and LRK55_RS16030 are separated by 79 nucleotides
LRK55_RS16030 and LRK55_RS16035 are separated by 49 nucleotides
LRK55_RS16035 and LRK55_RS16040 are separated by 26 nucleotides
LRK55_RS16040 and LRK55_RS16045 overlap by 4 nucleotides
LRK55_RS16025: LRK55_RS16025 - MFS transporter, at 3,498,882 to 3,500,129
_RS16025
LRK55_RS16030: LRK55_RS16030 - ectonucleotide pyrophosphatase/phosphodiesterase, at 3,500,209 to 3,501,495
_RS16030
LRK55_RS16035: LRK55_RS16035 - hypothetical protein, at 3,501,545 to 3,501,961
_RS16035
LRK55_RS16040: LRK55_RS16040 - methylated-DNA--[protein]-cysteine S-methyltransferase, at 3,501,988 to 3,502,500
_RS16040
LRK55_RS16045: LRK55_RS16045 - DNA-3-methyladenine glycosylase 2, at 3,502,497 to 3,504,002
_RS16045
Group
Condition
LRK55
_RS16025
LRK55
_RS16030
LRK55
_RS16035
LRK55
_RS16040
LRK55
_RS16045
pH
R2A_PIPES pH 4.25
-0.1
+0.0
-4.1
-0.0
-0.0
stress
R2A with Zinc chloride 2560 uM
-0.3
-0.6
-0.9
-0.3
-0.3
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.4
-0.5
-0.9
-0.3
-0.3
no stress control
no stress control
-0.4
-0.3
-1.2
-0.1
-0.4
stress
R2A with Zinc chloride 2560 uM
-0.4
-0.6
-0.8
-0.2
-0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.5
-0.1
-0.6
-0.3
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.1
-1.1
-0.1
-0.2
pH
R2A_PIPES pH 4.5
-0.2
-0.4
-1.1
+0.1
-0.1
no stress control
no stress control
-0.1
-0.1
-1.1
-0.1
-0.2
no stress control
no stress control
-0.4
-0.1
-0.3
-0.3
-0.2
no stress control
no stress control
-0.4
-0.1
-0.2
-0.2
-0.4
no stress control
no stress control
-0.3
-0.1
-0.3
-0.3
-0.2
pH
R2A_PIPES pH 4.25
-0.0
-0.7
-0.8
+0.2
+0.5
stress
R2A with Nickel (II) chloride 1696 uM
+0.0
-0.2
-1.2
+0.3
+0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.2
-0.7
-0.1
+0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
+0.2
-0.6
-0.1
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
+0.1
-0.5
+0.0
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.0
-0.2
-0.4
-0.1
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.2
-0.3
-0.2
+0.2
-0.2
pH
R2A_PIPES pH 4.5
+0.0
-0.1
-0.8
+0.2
+0.2
no stress control
no stress control
+0.2
+0.0
-0.5
-0.2
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.0
-0.3
+0.3
+0.0
+0.1
no stress control
no stress control
+0.1
-0.0
+0.3
+0.1
+0.1
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