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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS16015 and LRK55_RS16020 are separated by 79 nucleotides
LRK55_RS16020 and LRK55_RS16025 are separated by 91 nucleotides
LRK55_RS16025 and LRK55_RS16030 are separated by 79 nucleotides
LRK55_RS16030 and LRK55_RS16035 are separated by 49 nucleotides
LRK55_RS16015: LRK55_RS16015 - multidrug resistance efflux transporter family protein, at 3,497,239 to 3,498,225
_RS16015
LRK55_RS16020: LRK55_RS16020 - hypothetical protein, at 3,498,305 to 3,498,790
_RS16020
LRK55_RS16025: LRK55_RS16025 - MFS transporter, at 3,498,882 to 3,500,129
_RS16025
LRK55_RS16030: LRK55_RS16030 - ectonucleotide pyrophosphatase/phosphodiesterase, at 3,500,209 to 3,501,495
_RS16030
LRK55_RS16035: LRK55_RS16035 - hypothetical protein, at 3,501,545 to 3,501,961
_RS16035
Group
Condition
LRK55
_RS16015
LRK55
_RS16020
LRK55
_RS16025
LRK55
_RS16030
LRK55
_RS16035
pH
R2A_PIPES pH 4.25
+0.3
+0.3
-0.1
+0.0
-4.1
no stress control
no stress control
-1.0
-0.5
-0.4
-0.3
-1.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.7
-0.5
-0.5
-0.1
-0.6
pH
R2A_PIPES pH 4.5
-0.7
+0.1
-0.2
-0.4
-1.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
-0.2
-0.4
-0.5
-0.9
stress
R2A with Zinc chloride 2560 uM
-0.2
-0.0
-0.3
-0.6
-0.9
pH
R2A_PIPES pH 4.25
-0.4
+0.3
-0.0
-0.7
-0.8
stress
R2A with Zinc chloride 2560 uM
+0.3
-0.1
-0.4
-0.6
-0.8
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
-0.2
-0.1
-0.1
-1.1
no stress control
no stress control
-0.2
+0.0
-0.1
-0.1
-1.1
no stress control
no stress control
-0.1
-0.4
-0.4
-0.1
-0.2
no stress control
no stress control
-0.1
-0.1
-0.3
-0.1
-0.3
pH
R2A_PIPES pH 4.5
-0.2
+0.1
+0.0
-0.1
-0.8
no stress control
no stress control
+0.3
-0.2
-0.4
-0.1
-0.3
stress
R2A with Nickel (II) chloride 1696 uM
+0.6
+0.1
+0.0
-0.2
-1.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.4
+0.0
-0.0
-0.3
+0.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
+0.2
+0.1
-0.2
-0.7
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.2
+0.2
-0.2
-0.3
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.1
-0.1
+0.2
-0.6
no stress control
no stress control
-0.1
+0.2
+0.2
+0.0
-0.5
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.3
+0.1
+0.0
-0.2
-0.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.6
+0.2
-0.2
+0.1
-0.5
no stress control
no stress control
+0.4
+0.1
+0.1
-0.0
+0.3
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