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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS15910 and LRK55_RS15915 are separated by 87 nucleotides
LRK55_RS15915 and LRK55_RS15920 overlap by 4 nucleotides
LRK55_RS15920 and LRK55_RS15925 are separated by 4 nucleotides
LRK55_RS15925 and LRK55_RS15930 are separated by 90 nucleotides
LRK55_RS15910: LRK55_RS15910 - DUF1674 domain-containing protein, at 3,474,762 to 3,474,848
_RS15910
LRK55_RS15915: LRK55_RS15915 - succinate dehydrogenase, cytochrome b556 subunit, at 3,474,936 to 3,475,331
_RS15915
LRK55_RS15920: LRK55_RS15920 - succinate dehydrogenase, hydrophobic membrane anchor protein, at 3,475,328 to 3,475,741
_RS15920
LRK55_RS15925: LRK55_RS15925 - succinate dehydrogenase flavoprotein subunit, at 3,475,746 to 3,477,533
_RS15925
LRK55_RS15930: LRK55_RS15930 - succinate dehydrogenase iron-sulfur subunit, at 3,477,624 to 3,478,406
_RS15930
Group
Condition
LRK55
_RS15910
LRK55
_RS15915
LRK55
_RS15920
LRK55
_RS15925
LRK55
_RS15930
stress
R2A with Zinc chloride 2560 uM
-2.5
N.D.
N.D.
N.D.
N.D.
stress
R2A with Zinc chloride 2560 uM
-1.8
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-1.2
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
-0.6
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
-0.3
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
-0.3
N.D.
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
N.D.
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.25
-0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
+0.0
N.D.
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.25
+0.0
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.1
N.D.
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.5
+0.1
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
+0.1
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
+0.1
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
N.D.
N.D.
N.D.
N.D.
no stress control
no stress control
+0.3
N.D.
N.D.
N.D.
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.3
N.D.
N.D.
N.D.
N.D.
pH
R2A_PIPES pH 4.5
+0.3
N.D.
N.D.
N.D.
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
+0.3
N.D.
N.D.
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+1.0
N.D.
N.D.
N.D.
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+1.0
N.D.
N.D.
N.D.
N.D.
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