Fitness for 5 genes in Rhodanobacter denitrificans MT42

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500 ntLRK55_RS15855 and LRK55_RS15860 are separated by 114 nucleotidesLRK55_RS15860 and LRK55_RS15865 are separated by 76 nucleotidesLRK55_RS15865 and LRK55_RS15870 are separated by 11 nucleotidesLRK55_RS15870 and LRK55_RS15875 overlap by 14 nucleotides LRK55_RS15855: LRK55_RS15855 - acetoacetyl-CoA reductase, at 3,464,395 to 3,465,156 _RS15855 LRK55_RS15860: LRK55_RS15860 - polyhydroxyalkanoate synthesis repressor PhaR, at 3,465,271 to 3,465,768 _RS15860 LRK55_RS15865: LRK55_RS15865 - DHA2 family efflux MFS transporter permease subunit, at 3,465,845 to 3,467,407 _RS15865 LRK55_RS15870: LRK55_RS15870 - efflux RND transporter periplasmic adaptor subunit, at 3,467,419 to 3,468,627 _RS15870 LRK55_RS15875: LRK55_RS15875 - efflux transporter outer membrane subunit, at 3,468,614 to 3,470,092 _RS15875
Group Condition LRK55_RS15855 LRK55_RS15860 LRK55_RS15865 LRK55_RS15870 LRK55_RS15875
pH R2A_PIPES pH 4.25 +0.3 -3.6 -0.1 -0.5 -0.4
pH R2A_PIPES pH 4.25 +0.6 -3.2 -0.2 -0.2 +0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.0 -2.8 +0.1 -0.1 -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 -2.5 -0.3 -0.3 +0.1
stress R2A with Zinc chloride 2560 uM +0.0 -2.6 +0.0 -0.0 +0.2
stress R2A with Zinc chloride 2560 uM -0.0 -2.4 -0.1 +0.1 +0.2
stress R2A_PIPES with Cadmium chloride 64 uM +0.1 -1.5 -0.3 -0.0 -0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.1 -1.4 -0.0 -0.2 -0.2
stress R2A_PIPES with Cadmium chloride 64 uM +0.1 -1.5 -0.3 -0.1 -0.1
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.0 -1.4 -0.1 -0.4 +0.1
stress R2A with Nickel (II) chloride 1696 uM +0.3 -1.6 -0.0 -0.2 -0.1
stress R2A with Nickel (II) chloride 1696 uM -0.0 -1.3 -0.3 +0.2 -0.1
pH R2A_PIPES pH 4.5 +0.2 -1.4 -0.1 -0.1 -0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.0 -1.4 -0.0 -0.0 -0.1
no stress control no stress control -0.0 -1.2 -0.0 -0.1 -0.0
no stress control no stress control +0.2 -1.3 +0.0 -0.2 -0.1
no stress control no stress control -0.3 -1.2 +0.0 +0.0 +0.0
no stress control no stress control +0.1 -1.0 -0.0 -0.2 -0.1
pH R2A_PIPES pH 4.5 +0.3 -1.4 -0.1 +0.0 -0.1
no stress control no stress control +0.2 -1.3 -0.0 -0.1 -0.0
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.0 -1.3 +0.1 +0.0 +0.2
no stress control no stress control +0.1 -1.1 +0.1 +0.0 -0.1
no stress control no stress control +0.3 -0.6 +0.0 -0.1 +0.1
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