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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS15830 and LRK55_RS15835 are separated by 6 nucleotides
LRK55_RS15835 and LRK55_RS15840 are separated by 51 nucleotides
LRK55_RS15840 and LRK55_RS15845 are separated by 61 nucleotides
LRK55_RS15845 and LRK55_RS15850 overlap by 8 nucleotides
LRK55_RS15830: LRK55_RS15830 - heme ABC transporter permease, at 3,460,313 to 3,461,071
_RS15830
LRK55_RS15835: LRK55_RS15835 - heme exporter protein CcmB, at 3,461,078 to 3,461,764
_RS15835
LRK55_RS15840: LRK55_RS15840 - cytochrome c biogenesis heme-transporting ATPase CcmA, at 3,461,816 to 3,462,451
_RS15840
LRK55_RS15845: LRK55_RS15845 - DUF3293 domain-containing protein, at 3,462,513 to 3,462,920
_RS15845
LRK55_RS15850: LRK55_RS15850 - NAD(P)/FAD-dependent oxidoreductase, at 3,462,913 to 3,464,316
_RS15850
Group
Condition
LRK55
_RS15830
LRK55
_RS15835
LRK55
_RS15840
LRK55
_RS15845
LRK55
_RS15850
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
N.D.
-0.3
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
-0.5
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
N.D.
-0.2
-0.1
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
-0.3
+0.0
no stress control
no stress control
N.D.
N.D.
N.D.
-0.2
-0.0
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
N.D.
-0.2
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
-0.2
+0.0
no stress control
no stress control
N.D.
N.D.
N.D.
-0.0
-0.2
no stress control
no stress control
N.D.
N.D.
N.D.
+0.1
-0.2
no stress control
no stress control
N.D.
N.D.
N.D.
-0.1
-0.1
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
-0.1
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
N.D.
N.D.
-0.0
-0.1
no stress control
no stress control
N.D.
N.D.
N.D.
-0.1
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
N.D.
N.D.
-0.0
+0.0
no stress control
no stress control
N.D.
N.D.
N.D.
+0.0
+0.1
stress
R2A with Zinc chloride 2560 uM
N.D.
N.D.
N.D.
+0.1
-0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
N.D.
N.D.
+0.0
+0.0
pH
R2A_PIPES pH 4.25
N.D.
N.D.
N.D.
+0.3
-0.2
pH
R2A_PIPES pH 4.5
N.D.
N.D.
N.D.
+0.1
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
N.D.
N.D.
+0.2
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
N.D.
+0.4
-0.2
no stress control
no stress control
N.D.
N.D.
N.D.
+0.3
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
N.D.
N.D.
+0.2
+0.3
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