Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS15800 and LRK55_RS15805 overlap by 4 nucleotidesLRK55_RS15805 and LRK55_RS15810 are separated by 140 nucleotidesLRK55_RS15810 and LRK55_RS15815 overlap by 4 nucleotidesLRK55_RS15815 and LRK55_RS15820 are separated by 108 nucleotides LRK55_RS15800: LRK55_RS15800 - tetratricopeptide repeat protein, at 3,455,349 to 3,456,401 _RS15800 LRK55_RS15805: LRK55_RS15805 - cytochrome c-type biogenesis protein CcmH, at 3,456,398 to 3,456,838 _RS15805 LRK55_RS15810: LRK55_RS15810 - DsbE family thiol:disulfide interchange protein, at 3,456,979 to 3,457,521 _RS15810 LRK55_RS15815: LRK55_RS15815 - heme lyase CcmF/NrfE family subunit, at 3,457,518 to 3,459,497 _RS15815 LRK55_RS15820: LRK55_RS15820 - cytochrome c maturation protein CcmE, at 3,459,606 to 3,460,055 _RS15820
Group Condition LRK55_RS15800 LRK55_RS15805 LRK55_RS15810 LRK55_RS15815 LRK55_RS15820
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. -0.6 N.D. N.D. N.D.
pH R2A_PIPES pH 4.25 N.D. -0.3 N.D. N.D. N.D.
no stress control no stress control N.D. -0.2 N.D. N.D. N.D.
no stress control no stress control N.D. -0.1 N.D. N.D. N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x N.D. -0.1 N.D. N.D. N.D.
stress R2A_PIPES with Cadmium chloride 64 uM N.D. -0.0 N.D. N.D. N.D.
no stress control no stress control N.D. +0.0 N.D. N.D. N.D.
pH R2A_PIPES pH 4.5 N.D. +0.1 N.D. N.D. N.D.
no stress control no stress control N.D. +0.1 N.D. N.D. N.D.
stress R2A with Nickel (II) chloride 1696 uM N.D. +0.2 N.D. N.D. N.D.
stress R2A with Zinc chloride 2560 uM N.D. +0.2 N.D. N.D. N.D.
no stress control no stress control N.D. +0.3 N.D. N.D. N.D.
pH R2A_PIPES pH 4.5 N.D. +0.3 N.D. N.D. N.D.
no stress control no stress control N.D. +0.3 N.D. N.D. N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. +0.3 N.D. N.D. N.D.
no stress control no stress control N.D. +0.3 N.D. N.D. N.D.
stress R2A with Zinc chloride 2560 uM N.D. +0.4 N.D. N.D. N.D.
stress R2A with Nickel (II) chloride 1696 uM N.D. +0.4 N.D. N.D. N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. +0.4 N.D. N.D. N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM N.D. +0.5 N.D. N.D. N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM N.D. +0.7 N.D. N.D. N.D.
stress R2A_PIPES with Cadmium chloride 64 uM N.D. +0.8 N.D. N.D. N.D.
pH R2A_PIPES pH 4.25 N.D. +0.9 N.D. N.D. N.D.
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