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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS15710 and LRK55_RS15715 are separated by 47 nucleotides
LRK55_RS15715 and LRK55_RS15720 are separated by 154 nucleotides
LRK55_RS15720 and LRK55_RS15725 are separated by 89 nucleotides
LRK55_RS15725 and LRK55_RS15730 are separated by 7 nucleotides
LRK55_RS15710: LRK55_RS15710 - YdiU family protein, at 3,437,993 to 3,439,552
_RS15710
LRK55_RS15715: LRK55_RS15715 - tRNA-Arg, at 3,439,600 to 3,439,676
_RS15715
LRK55_RS15720: LRK55_RS15720 - aldehyde dehydrogenase family protein, at 3,439,831 to 3,441,366
_RS15720
LRK55_RS15725: LRK55_RS15725 - DUF4190 domain-containing protein, at 3,441,456 to 3,441,758
_RS15725
LRK55_RS15730: LRK55_RS15730 - SDR family oxidoreductase, at 3,441,766 to 3,442,527
_RS15730
Group
Condition
LRK55
_RS15710
LRK55
_RS15715
LRK55
_RS15720
LRK55
_RS15725
LRK55
_RS15730
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.0
N.D.
-3.3
-0.6
+0.2
no stress control
no stress control
+0.1
N.D.
-2.5
-1.3
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.2
N.D.
-2.7
-0.7
+0.1
no stress control
no stress control
-0.0
N.D.
-3.0
+0.0
-0.0
stress
R2A with Zinc chloride 2560 uM
+0.0
N.D.
-2.4
+0.4
-0.4
no stress control
no stress control
+0.0
N.D.
-2.7
+0.3
-0.1
no stress control
no stress control
-0.0
N.D.
-2.3
+0.2
-0.3
pH
R2A_PIPES pH 4.5
+0.2
N.D.
-1.3
-0.7
-0.0
pH
R2A_PIPES pH 4.25
+0.3
N.D.
-1.2
-1.0
+0.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
N.D.
-0.3
-1.4
+0.0
no stress control
no stress control
+0.1
N.D.
-1.6
+0.1
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.0
N.D.
-0.3
-0.7
-0.1
stress
R2A with Nickel (II) chloride 1696 uM
+0.2
N.D.
-0.8
-0.4
-0.0
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
N.D.
-1.7
+0.7
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.1
N.D.
-1.9
+0.6
+0.3
pH
R2A_PIPES pH 4.5
+0.1
N.D.
-1.2
+0.4
-0.2
pH
R2A_PIPES pH 4.25
+0.2
N.D.
-1.9
+0.6
+0.3
no stress control
no stress control
+0.1
N.D.
-1.3
+0.7
-0.3
stress
R2A with Zinc chloride 2560 uM
-0.1
N.D.
-1.6
+1.0
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.1
N.D.
-2.0
+1.4
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.2
N.D.
-1.6
+1.0
+0.1
no stress control
no stress control
+0.1
N.D.
-1.0
+0.6
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
N.D.
-0.6
+1.0
-0.2
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