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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS15510 and LRK55_RS15515 overlap by 4 nucleotides
LRK55_RS15515 and LRK55_RS15520 are separated by 8 nucleotides
LRK55_RS15520 and LRK55_RS15525 are separated by 266 nucleotides
LRK55_RS15525 and LRK55_RS15530 are separated by 213 nucleotides
LRK55_RS15510: LRK55_RS15510 - ABC transporter ATP-binding protein, at 3,396,199 to 3,397,125
_RS15510
LRK55_RS15515: LRK55_RS15515 - ABC transporter permease, at 3,397,122 to 3,397,883
_RS15515
LRK55_RS15520: LRK55_RS15520 - hypothetical protein, at 3,397,892 to 3,398,389
_RS15520
LRK55_RS15525: LRK55_RS15525 - DUF3014 domain-containing protein, at 3,398,656 to 3,399,507
_RS15525
LRK55_RS15530: LRK55_RS15530 - HD domain-containing phosphohydrolase, at 3,399,721 to 3,400,833
_RS15530
Group
Condition
LRK55
_RS15510
LRK55
_RS15515
LRK55
_RS15520
LRK55
_RS15525
LRK55
_RS15530
no stress control
no stress control
-0.3
-0.4
-0.6
+0.1
-0.1
stress
R2A with Zinc chloride 2560 uM
-0.3
-0.2
-0.5
-0.1
-0.0
no stress control
no stress control
-0.1
-0.6
-0.3
+0.1
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-0.2
-0.4
-0.0
-0.0
pH
R2A_PIPES pH 4.5
+0.0
-0.3
-0.2
-0.1
-0.2
pH
R2A_PIPES pH 4.25
+0.2
-0.6
-0.0
-0.1
-0.1
no stress control
no stress control
-0.2
-0.2
-0.2
-0.0
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.5
-0.4
+0.3
-0.1
+0.2
no stress control
no stress control
-0.3
-0.1
-0.1
+0.0
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
+0.1
-0.0
-0.1
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-0.2
+0.1
-0.1
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.1
-0.1
-0.2
+0.0
+0.1
pH
R2A_PIPES pH 4.25
+0.3
+0.1
-0.6
-0.1
+0.0
no stress control
no stress control
-0.2
-0.3
+0.3
-0.0
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.1
-0.1
+0.1
-0.0
+0.0
no stress control
no stress control
+0.1
-0.2
+0.1
-0.0
-0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
-0.1
+0.2
-0.0
-0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.1
-0.6
+0.1
+0.1
+0.4
stress
R2A with Nickel (II) chloride 1696 uM
-0.0
-0.2
+0.3
+0.1
-0.0
pH
R2A_PIPES pH 4.5
+0.1
-0.3
+0.2
+0.0
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.2
-0.1
+0.3
-0.0
+0.2
stress
R2A with Zinc chloride 2560 uM
-0.4
-0.3
+0.9
-0.0
+0.1
no stress control
no stress control
+0.0
-0.1
+0.5
-0.0
+0.1
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