Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS15465 and LRK55_RS15470 overlap by 4 nucleotidesLRK55_RS15470 and LRK55_RS15475 are separated by 140 nucleotidesLRK55_RS15475 and LRK55_RS15480 are separated by 150 nucleotidesLRK55_RS15480 and LRK55_RS15485 are separated by 94 nucleotides LRK55_RS15465: LRK55_RS15465 - glycine betaine ABC transporter substrate-binding protein, at 3,387,581 to 3,389,089 _RS15465 LRK55_RS15470: LRK55_RS15470 - ATP-binding cassette domain-containing protein, at 3,389,086 to 3,389,853 _RS15470 LRK55_RS15475: LRK55_RS15475 - GGDEF domain-containing protein, at 3,389,994 to 3,391,376 _RS15475 LRK55_RS15480: LRK55_RS15480 - organic hydroperoxide resistance protein, at 3,391,527 to 3,391,952 _RS15480 LRK55_RS15485: LRK55_RS15485 - MarR family transcriptional regulator, at 3,392,047 to 3,392,514 _RS15485
Group Condition LRK55_RS15465 LRK55_RS15470 LRK55_RS15475 LRK55_RS15480 LRK55_RS15485
pH R2A_PIPES pH 4.5 -0.1 -0.3 +0.0 -0.3 -0.2
stress R2A_PIPES with Aluminum chloride 0.140625 mM +0.0 -0.1 -0.1 -0.4 -0.4
no stress control no stress control +0.0 -0.1 +0.1 -0.2 -0.2
no stress control no stress control -0.1 -0.1 -0.1 -0.1 +0.1
stress R2A with Zinc chloride 2560 uM -0.1 +0.3 +0.1 -0.5 -0.0
pH R2A_PIPES pH 4.5 -0.1 -0.3 +0.1 +0.5 -0.3
no stress control no stress control +0.0 -0.2 -0.1 +0.1 +0.2
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.1 +0.1 -0.2 +0.0 +0.0
stress R2A with Nickel (II) chloride 1696 uM -0.1 +0.2 +0.0 +0.2 -0.1
no stress control no stress control -0.1 +0.1 -0.0 +0.2 -0.0
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.1 -0.0 +0.1 +0.3 -0.0
pH R2A_PIPES pH 4.25 +0.1 +0.0 +0.1 -0.3 +0.4
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.1 +0.2 -0.0 +0.5 -0.3
no stress control no stress control +0.1 +0.1 +0.2 +0.1 -0.1
stress R2A_PIPES with Cadmium chloride 64 uM -0.1 +0.2 -0.0 +0.3 +0.1
stress R2A with Zinc chloride 2560 uM +0.0 +0.2 +0.2 +0.2 -0.1
no stress control no stress control +0.1 +0.4 +0.3 -0.2 +0.0
stress R2A_PIPES with Cadmium chloride 64 uM -0.0 +0.2 +0.4 -0.1 +0.2
stress R2A with Nickel (II) chloride 1696 uM -0.1 +0.0 -0.2 +0.8 +0.1
no stress control no stress control -0.1 +0.6 +0.2 +0.1 -0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 +0.5 -0.0 +0.1 +0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.0 +0.5 +0.1 +0.3 -0.1
pH R2A_PIPES pH 4.25 -0.1 +0.8 +0.1 -0.4 +0.7
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