Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS15015 and LRK55_RS15020 are separated by 10 nucleotidesLRK55_RS15020 and LRK55_RS15025 are separated by 167 nucleotidesLRK55_RS15025 and LRK55_RS15030 are separated by 3 nucleotidesLRK55_RS15030 and LRK55_RS15035 overlap by 38 nucleotides LRK55_RS15015: LRK55_RS15015 - TetR/AcrR family transcriptional regulator, at 3,301,586 to 3,302,188 _RS15015 LRK55_RS15020: LRK55_RS15020 - alpha/beta hydrolase, at 3,302,199 to 3,303,101 _RS15020 LRK55_RS15025: LRK55_RS15025 - methylmalonyl-CoA mutase family protein, at 3,303,269 to 3,306,949 _RS15025 LRK55_RS15030: LRK55_RS15030 - nucleotidyltransferase family protein, at 3,306,953 to 3,307,492 _RS15030 LRK55_RS15035: LRK55_RS15035 - hypothetical protein, at 3,307,455 to 3,307,658 _RS15035
Group Condition LRK55_RS15015 LRK55_RS15020 LRK55_RS15025 LRK55_RS15030 LRK55_RS15035
pH R2A_PIPES pH 4.25 +0.1 -0.3 +0.2 -1.4 N.D.
stress R2A with Nickel (II) chloride 1696 uM +0.1 -0.1 -0.2 -0.8 N.D.
stress R2A with Nickel (II) chloride 1696 uM -0.1 -0.0 -0.2 -0.7 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.1 -0.1 +0.1 -0.6 N.D.
pH R2A_PIPES pH 4.5 +0.0 +0.0 +0.1 -0.8 N.D.
no stress control no stress control +0.3 -0.1 -0.0 -0.8 N.D.
no stress control no stress control -0.1 -0.1 -0.1 -0.2 N.D.
stress R2A with Zinc chloride 2560 uM +0.2 -0.2 +0.0 -0.4 N.D.
no stress control no stress control +0.0 -0.1 -0.0 -0.3 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.2 -0.2 +0.1 -0.6 N.D.
pH R2A_PIPES pH 4.5 +0.1 +0.0 -0.1 -0.4 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.2 -0.1 +0.1 -0.5 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.1 +0.1 -0.1 -0.5 N.D.
no stress control no stress control +0.1 -0.4 -0.0 -0.1 N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.0 +0.1 -0.1 -0.3 N.D.
stress R2A_PIPES with Cadmium chloride 64 uM +0.2 -0.2 +0.0 -0.3 N.D.
stress R2A with Zinc chloride 2560 uM +0.1 -0.2 +0.0 -0.2 N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.0 -0.1 -0.0 -0.0 N.D.
no stress control no stress control +0.1 -0.0 -0.1 -0.1 N.D.
pH R2A_PIPES pH 4.25 +0.1 -0.2 +0.2 -0.0 N.D.
no stress control no stress control +0.2 -0.0 +0.0 -0.2 N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM +0.1 +0.1 +0.0 -0.1 N.D.
no stress control no stress control +0.0 +0.1 -0.0 +0.2 N.D.
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