Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS14840 and LRK55_RS14845 are separated by 4 nucleotidesLRK55_RS14845 and LRK55_RS14850 are separated by 15 nucleotidesLRK55_RS14850 and LRK55_RS14855 overlap by 14 nucleotidesLRK55_RS14855 and LRK55_RS14860 are separated by 164 nucleotides LRK55_RS14840: LRK55_RS14840 - aspartate 1-decarboxylase, at 3,262,998 to 3,263,390 _RS14840 LRK55_RS14845: LRK55_RS14845 - tRNA epoxyqueuosine(34) reductase QueG, at 3,263,395 to 3,264,492 _RS14845 LRK55_RS14850: LRK55_RS14850 - NAD(P)H-hydrate dehydratase, at 3,264,508 to 3,266,001 _RS14850 LRK55_RS14855: LRK55_RS14855 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE, at 3,265,988 to 3,266,473 _RS14855 LRK55_RS14860: LRK55_RS14860 - N-acetylmuramoyl-L-alanine amidase, at 3,266,638 to 3,268,146 _RS14860
Group Condition LRK55_RS14840 LRK55_RS14845 LRK55_RS14850 LRK55_RS14855 LRK55_RS14860
stress R2A with Zinc chloride 2560 uM -1.8 -0.2 -0.5 N.D. N.D.
stress R2A with Nickel (II) chloride 1696 uM -1.5 -0.0 -0.4 N.D. N.D.
stress R2A with Nickel (II) chloride 1696 uM -1.5 +0.1 -0.3 N.D. N.D.
stress R2A with Zinc chloride 2560 uM -1.8 -0.0 +0.2 N.D. N.D.
no stress control no stress control -1.1 -0.4 -0.2 N.D. N.D.
no stress control no stress control -1.2 -0.2 -0.1 N.D. N.D.
no stress control no stress control -1.0 -0.3 +0.0 N.D. N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.9 -0.1 -0.3 N.D. N.D.
no stress control no stress control -1.4 -0.1 +0.3 N.D. N.D.
pH R2A_PIPES pH 4.5 -0.2 -0.3 -0.4 N.D. N.D.
no stress control no stress control -0.9 -0.1 +0.1 N.D. N.D.
no stress control no stress control -0.8 -0.2 +0.1 N.D. N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.7 -0.1 -0.0 N.D. N.D.
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.6 -0.2 +0.1 N.D. N.D.
stress R2A_PIPES with Cadmium chloride 64 uM -0.1 -0.1 -0.4 N.D. N.D.
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.5 -0.0 -0.0 N.D. N.D.
no stress control no stress control -0.3 -0.0 -0.1 N.D. N.D.
stress R2A_PIPES with Cadmium chloride 64 uM -0.0 -0.2 -0.1 N.D. N.D.
pH R2A_PIPES pH 4.5 +0.2 -0.0 -0.0 N.D. N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.7 -0.0 -0.4 N.D. N.D.
stress R2A with Metal_ion_mix_sitestressplate 2 x +0.8 -0.1 -0.2 N.D. N.D.
pH R2A_PIPES pH 4.25 +1.4 -0.3 -0.2 N.D. N.D.
pH R2A_PIPES pH 4.25 +2.1 -0.0 +0.1 N.D. N.D.
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