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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS14785 and LRK55_RS14790 are separated by 64 nucleotides
LRK55_RS14790 and LRK55_RS14795 are separated by 105 nucleotides
LRK55_RS14795 and LRK55_RS14800 are separated by 126 nucleotides
LRK55_RS14800 and LRK55_RS14805 are separated by 33 nucleotides
LRK55_RS14785: LRK55_RS14785 - PhoH family protein, at 3,254,167 to 3,255,549
_RS14785
LRK55_RS14790: LRK55_RS14790 - peroxiredoxin, at 3,255,614 to 3,256,075
_RS14790
LRK55_RS14795: LRK55_RS14795 - glycine cleavage system protein R, at 3,256,181 to 3,256,756
_RS14795
LRK55_RS14800: LRK55_RS14800 - 4-hydroxy-tetrahydrodipicolinate synthase, at 3,256,883 to 3,257,779
_RS14800
LRK55_RS14805: LRK55_RS14805 - hypothetical protein, at 3,257,813 to 3,258,403
_RS14805
Group
Condition
LRK55
_RS14785
LRK55
_RS14790
LRK55
_RS14795
LRK55
_RS14800
LRK55
_RS14805
pH
R2A_PIPES pH 4.25
-0.8
-0.5
-2.1
N.D.
-4.0
pH
R2A_PIPES pH 4.25
-1.0
-0.4
-1.0
N.D.
-3.5
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.1
+0.0
-1.6
N.D.
-1.7
pH
R2A_PIPES pH 4.5
-0.8
-0.3
-0.8
N.D.
-2.6
no stress control
no stress control
-0.7
-0.4
-1.4
N.D.
-1.4
stress
R2A_PIPES with Cadmium chloride 64 uM
-1.1
-0.1
-1.2
N.D.
-1.4
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.4
-0.7
-1.3
N.D.
-1.0
no stress control
no stress control
-0.4
-0.4
-0.5
N.D.
-1.7
no stress control
no stress control
-0.6
-0.4
-0.8
N.D.
-1.1
no stress control
no stress control
-0.4
-0.5
-0.8
N.D.
-1.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.4
-0.3
-0.4
N.D.
-1.8
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
-0.2
-0.6
N.D.
-1.5
pH
R2A_PIPES pH 4.5
-0.7
-0.1
-0.3
N.D.
-1.5
stress
R2A with Nickel (II) chloride 1696 uM
-0.6
-0.3
-0.6
N.D.
-0.9
no stress control
no stress control
-0.3
-0.4
-0.4
N.D.
-1.3
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.4
-0.3
-0.4
N.D.
-1.2
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.5
-0.3
-0.3
N.D.
-1.1
stress
R2A with Zinc chloride 2560 uM
-0.6
-0.3
-0.4
N.D.
-0.8
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-0.0
-1.0
N.D.
-0.8
stress
R2A with Zinc chloride 2560 uM
-0.5
-0.3
-0.3
N.D.
-0.8
no stress control
no stress control
-0.4
-0.1
-0.4
N.D.
-1.0
no stress control
no stress control
-0.5
-0.6
-0.2
N.D.
-0.4
stress
R2A with Nickel (II) chloride 1696 uM
-0.5
-0.4
-0.2
N.D.
-0.4
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