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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Number of genes on each side:
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS14720 and LRK55_RS14725 are separated by 7 nucleotides
LRK55_RS14725 and LRK55_RS14730 are separated by 69 nucleotides
LRK55_RS14730 and LRK55_RS14735 are separated by 84 nucleotides
LRK55_RS14735 and LRK55_RS14740 are separated by 94 nucleotides
LRK55_RS14720: LRK55_RS14720 - UDP-2,3-diacylglucosamine diphosphatase, at 3,240,503 to 3,241,231
_RS14720
LRK55_RS14725: LRK55_RS14725 - peptidylprolyl isomerase, at 3,241,239 to 3,241,955
_RS14725
LRK55_RS14730: LRK55_RS14730 - Ppx/GppA phosphatase family protein, at 3,242,025 to 3,243,542
_RS14730
LRK55_RS14735: LRK55_RS14735 - polyphosphate kinase 1, at 3,243,627 to 3,245,720
_RS14735
LRK55_RS14740: LRK55_RS14740 - phosphate regulon sensor histidine kinase PhoR, at 3,245,815 to 3,247,083
_RS14740
Group
Condition
LRK55
_RS14720
LRK55
_RS14725
LRK55
_RS14730
LRK55
_RS14735
LRK55
_RS14740
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-1.2
-2.4
-0.0
-0.2
stress
R2A with Zinc chloride 2560 uM
N.D.
-1.2
-1.5
+0.1
-0.7
no stress control
no stress control
N.D.
-0.6
-1.2
-0.3
-1.1
pH
R2A_PIPES pH 4.25
N.D.
-1.3
-3.0
+0.0
+1.2
stress
R2A with Zinc chloride 2560 uM
N.D.
-1.3
-0.8
-0.2
-0.4
pH
R2A_PIPES pH 4.5
N.D.
-1.0
-1.8
+0.0
+0.3
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-0.3
-0.2
-0.4
-1.5
no stress control
no stress control
N.D.
-0.6
-1.1
-0.1
-0.3
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
-1.1
-1.6
+0.1
+0.6
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.1
-0.9
-0.2
-0.8
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-1.3
-0.6
-0.1
+0.0
pH
R2A_PIPES pH 4.5
N.D.
-0.7
-1.1
-0.0
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
N.D.
-0.4
-0.3
-0.4
-0.6
stress
R2A_PIPES with Cadmium chloride 64 uM
N.D.
-1.4
-0.6
-0.3
+0.9
no stress control
no stress control
N.D.
-0.2
-1.0
+0.0
-0.1
no stress control
no stress control
N.D.
+0.0
-0.9
+0.0
-0.5
pH
R2A_PIPES pH 4.25
N.D.
-0.1
-2.5
+0.3
+1.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.4
-0.4
-0.2
-0.0
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.3
-0.7
+0.1
+0.0
no stress control
no stress control
N.D.
-0.3
-0.2
-0.1
-0.4
no stress control
no stress control
N.D.
-0.1
-0.9
+0.0
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
N.D.
-0.8
-0.6
+0.2
+0.7
no stress control
no stress control
N.D.
+0.2
-0.3
+0.0
-0.0
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