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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS14710 and LRK55_RS14715 are separated by 77 nucleotides
LRK55_RS14715 and LRK55_RS14720 are separated by 356 nucleotides
LRK55_RS14720 and LRK55_RS14725 are separated by 7 nucleotides
LRK55_RS14725 and LRK55_RS14730 are separated by 69 nucleotides
LRK55_RS14710: LRK55_RS14710 - carbon storage regulator CsrA, at 3,239,773 to 3,239,976
_RS14710
LRK55_RS14715: LRK55_RS14715 - tRNA-Ser, at 3,240,054 to 3,240,146
_RS14715
LRK55_RS14720: LRK55_RS14720 - UDP-2,3-diacylglucosamine diphosphatase, at 3,240,503 to 3,241,231
_RS14720
LRK55_RS14725: LRK55_RS14725 - peptidylprolyl isomerase, at 3,241,239 to 3,241,955
_RS14725
LRK55_RS14730: LRK55_RS14730 - Ppx/GppA phosphatase family protein, at 3,242,025 to 3,243,542
_RS14730
Group
Condition
LRK55
_RS14710
LRK55
_RS14715
LRK55
_RS14720
LRK55
_RS14725
LRK55
_RS14730
pH
R2A_PIPES pH 4.25
-1.0
N.D.
N.D.
-1.3
-3.0
stress
R2A with Zinc chloride 2560 uM
-2.2
N.D.
N.D.
-1.2
-1.5
stress
R2A with Zinc chloride 2560 uM
-2.4
N.D.
N.D.
-1.3
-0.8
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
N.D.
N.D.
-1.2
-2.4
pH
R2A_PIPES pH 4.25
-0.8
N.D.
N.D.
-0.1
-2.5
pH
R2A_PIPES pH 4.5
-0.3
N.D.
N.D.
-1.0
-1.8
stress
R2A with Nickel (II) chloride 1696 uM
-1.3
N.D.
N.D.
-0.8
-0.6
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.0
N.D.
N.D.
-1.1
-1.6
pH
R2A_PIPES pH 4.5
-0.7
N.D.
N.D.
-0.7
-1.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.2
N.D.
N.D.
-1.4
-0.6
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
N.D.
N.D.
-1.3
-0.6
no stress control
no stress control
-0.0
N.D.
N.D.
-0.6
-1.2
stress
R2A with Nickel (II) chloride 1696 uM
-0.7
N.D.
N.D.
-0.3
-0.7
no stress control
no stress control
-0.3
N.D.
N.D.
-0.2
-1.0
no stress control
no stress control
+0.2
N.D.
N.D.
-0.6
-1.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
N.D.
N.D.
-0.4
-0.4
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
N.D.
N.D.
-0.1
-0.9
no stress control
no stress control
+0.1
N.D.
N.D.
+0.0
-0.9
no stress control
no stress control
+0.3
N.D.
N.D.
-0.1
-0.9
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.0
N.D.
N.D.
-0.3
-0.2
no stress control
no stress control
-0.0
N.D.
N.D.
-0.3
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.3
N.D.
N.D.
-0.4
-0.3
no stress control
no stress control
-0.0
N.D.
N.D.
+0.2
-0.3
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