Fitness for 5 genes in Rhodanobacter denitrificans MT42

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Top 23 experiments (either direction), sorted by average fitness

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500 ntLRK55_RS14615 and LRK55_RS14620 are separated by 183 nucleotidesLRK55_RS14620 and LRK55_RS14625 are separated by 142 nucleotidesLRK55_RS14625 and LRK55_RS14630 are separated by 68 nucleotidesLRK55_RS14630 and LRK55_RS14635 are separated by 30 nucleotides LRK55_RS14615: LRK55_RS14615 - TonB-dependent siderophore receptor, at 3,215,123 to 3,217,306 _RS14615 LRK55_RS14620: LRK55_RS14620 - phosphotransferase, at 3,217,490 to 3,218,626 _RS14620 LRK55_RS14625: LRK55_RS14625 - AEC family transporter, at 3,218,769 to 3,219,662 _RS14625 LRK55_RS14630: LRK55_RS14630 - response regulator, at 3,219,731 to 3,220,318 _RS14630 LRK55_RS14635: LRK55_RS14635 - RNA-binding S4 domain-containing protein, at 3,220,349 to 3,220,747 _RS14635
Group Condition LRK55_RS14615 LRK55_RS14620 LRK55_RS14625 LRK55_RS14630 LRK55_RS14635
pH R2A_PIPES pH 4.25 -0.1 N.D. +0.1 -0.1 -0.8
pH R2A_PIPES pH 4.25 -0.2 N.D. -0.4 +0.5 +0.1
no stress control no stress control -0.2 N.D. +0.0 -0.1 +0.4
no stress control no stress control -0.1 N.D. +0.2 -0.1 +0.0
stress R2A_PIPES with Cadmium chloride 64 uM -0.1 N.D. +0.1 -0.1 +0.2
no stress control no stress control -0.1 N.D. +0.2 -0.0 +0.1
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.2 N.D. +0.0 +0.0 +0.4
stress R2A_PIPES with Cadmium chloride 64 uM -0.1 N.D. +0.0 -0.1 +0.4
pH R2A_PIPES pH 4.5 -0.2 N.D. +0.3 +0.1 +0.1
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.3 N.D. +0.3 -0.1 +0.4
stress R2A with Nickel (II) chloride 1696 uM -0.1 N.D. -0.0 +0.0 +0.5
pH R2A_PIPES pH 4.5 -0.1 N.D. +0.1 +0.4 -0.1
stress R2A with Nickel (II) chloride 1696 uM -0.2 N.D. +0.2 +0.1 +0.3
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.1 N.D. +0.0 +0.1 +0.3
no stress control no stress control -0.1 N.D. +0.1 +0.1 +0.2
no stress control no stress control -0.1 N.D. +0.1 +0.3 +0.0
no stress control no stress control +0.0 N.D. +0.2 -0.1 +0.3
stress R2A_PIPES with Aluminum chloride 0.140625 mM -0.0 N.D. +0.3 -0.1 +0.4
no stress control no stress control -0.1 N.D. +0.2 +0.1 +0.3
stress R2A with Metal_ion_mix_sitestressplate 2 x -0.0 N.D. +0.2 +0.2 +0.4
stress R2A with Zinc chloride 2560 uM -0.1 N.D. +0.1 +0.1 +0.7
stress R2A with Zinc chloride 2560 uM -0.1 N.D. +0.2 +0.2 +0.6
stress R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM -0.0 N.D. +0.2 +0.4 +0.7
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