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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS14445 and LRK55_RS14450 overlap by 4 nucleotides
LRK55_RS14450 and LRK55_RS14455 are separated by 99 nucleotides
LRK55_RS14455 and LRK55_RS14460 are separated by 149 nucleotides
LRK55_RS14460 and LRK55_RS14465 are separated by 85 nucleotides
LRK55_RS14445: LRK55_RS14445 - methionine ABC transporter permease, at 3,183,972 to 3,184,649
_RS14445
LRK55_RS14450: LRK55_RS14450 - methionine ABC transporter ATP-binding protein, at 3,184,646 to 3,185,656
_RS14450
LRK55_RS14455: LRK55_RS14455 - glutathione peroxidase, at 3,185,756 to 3,186,241
_RS14455
LRK55_RS14460: LRK55_RS14460 - peptidylprolyl isomerase, at 3,186,391 to 3,186,873
_RS14460
LRK55_RS14465: LRK55_RS14465 - phospholipase A, at 3,186,959 to 3,188,056
_RS14465
Group
Condition
LRK55
_RS14445
LRK55
_RS14450
LRK55
_RS14455
LRK55
_RS14460
LRK55
_RS14465
pH
R2A_PIPES pH 4.5
-0.8
-1.0
-0.1
-0.2
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
-1.1
-0.9
+0.2
-0.1
+0.1
pH
R2A_PIPES pH 4.25
-0.8
-1.0
-0.2
-0.0
+0.2
stress
R2A with Nickel (II) chloride 1696 uM
-1.0
-0.6
+0.0
-0.2
+0.1
pH
R2A_PIPES pH 4.5
-0.6
-1.0
+0.2
-0.2
+0.3
no stress control
no stress control
-0.2
-0.6
-0.1
-0.1
-0.1
no stress control
no stress control
-0.3
-0.4
-0.1
-0.1
-0.2
pH
R2A_PIPES pH 4.25
-1.3
-0.3
-0.3
+0.5
+0.3
no stress control
no stress control
-0.6
-0.2
+0.0
-0.2
+0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.2
-0.8
-0.1
+0.2
-0.0
no stress control
no stress control
-0.2
-0.4
-0.1
+0.1
-0.2
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.1
-0.1
-0.3
-0.2
-0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.2
-0.0
-0.4
-0.0
-0.2
stress
R2A with Zinc chloride 2560 uM
-0.2
+0.1
-0.1
-0.1
-0.1
no stress control
no stress control
-0.2
+0.1
-0.2
-0.1
+0.1
no stress control
no stress control
-0.2
-0.2
-0.1
-0.1
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.0
+0.1
+0.0
-0.4
+0.0
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.3
+0.2
+0.2
-0.3
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-0.2
-0.0
+0.2
+0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.0
-0.1
+0.2
+0.0
stress
R2A with Zinc chloride 2560 uM
-0.2
+0.4
-0.2
-0.3
+0.2
no stress control
no stress control
-0.5
+0.0
+0.5
-0.2
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.5
+0.1
+0.1
+0.1
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