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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS14400 and LRK55_RS14405 are separated by 13 nucleotides
LRK55_RS14405 and LRK55_RS14410 are separated by 201 nucleotides
LRK55_RS14410 and LRK55_RS14415 are separated by 92 nucleotides
LRK55_RS14415 and LRK55_RS14420 are separated by 157 nucleotides
LRK55_RS14400: LRK55_RS14400 - NAD(P)-dependent oxidoreductase, at 3,175,799 to 3,176,683
_RS14400
LRK55_RS14405: LRK55_RS14405 - PhzF family phenazine biosynthesis protein, at 3,176,697 to 3,177,575
_RS14405
LRK55_RS14410: LRK55_RS14410 - rhomboid family intramembrane serine protease, at 3,177,777 to 3,178,382
_RS14410
LRK55_RS14415: LRK55_RS14415 - hypothetical protein, at 3,178,475 to 3,178,783
_RS14415
LRK55_RS14420: LRK55_RS14420 - hypothetical protein, at 3,178,941 to 3,179,348
_RS14420
Group
Condition
LRK55
_RS14400
LRK55
_RS14405
LRK55
_RS14410
LRK55
_RS14415
LRK55
_RS14420
stress
R2A with Zinc chloride 2560 uM
+0.2
-0.4
-4.5
N.D.
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
-0.1
-4.3
N.D.
-0.0
no stress control
no stress control
-0.2
-0.3
-3.9
N.D.
-0.1
pH
R2A_PIPES pH 4.5
+0.2
-0.5
-4.0
N.D.
+0.1
stress
R2A with Zinc chloride 2560 uM
+0.2
+0.0
-4.6
N.D.
+0.1
stress
R2A with Nickel (II) chloride 1696 uM
-0.2
+0.1
-4.1
N.D.
+0.0
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-0.2
-3.9
N.D.
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.1
-3.9
N.D.
+0.0
no stress control
no stress control
-0.1
-0.1
-3.9
N.D.
+0.1
no stress control
no stress control
-0.2
-0.0
-3.7
N.D.
+0.1
no stress control
no stress control
-0.4
+0.1
-3.5
N.D.
+0.0
pH
R2A_PIPES pH 4.5
+0.2
-0.2
-3.7
N.D.
+0.1
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.2
-0.0
-3.7
N.D.
-0.1
no stress control
no stress control
-0.2
-0.1
-3.3
N.D.
+0.0
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
-0.1
-3.8
N.D.
+0.0
no stress control
no stress control
+0.0
+0.1
-3.7
N.D.
+0.0
stress
R2A_PIPES with Cadmium chloride 64 uM
+0.0
-0.1
-3.4
N.D.
+0.1
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.2
-0.1
-3.4
N.D.
-0.1
pH
R2A_PIPES pH 4.25
+0.2
-0.6
-3.7
N.D.
+0.8
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
-0.1
-3.0
N.D.
-0.1
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.0
+0.2
-3.1
N.D.
+0.0
no stress control
no stress control
+0.4
-0.2
-3.0
N.D.
+0.0
pH
R2A_PIPES pH 4.25
-0.3
+0.8
-4.0
N.D.
+0.8
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