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Fitness for 5 genes in
Rhodanobacter denitrificans MT42
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Top 23 experiments (either direction), sorted by average fitness
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500 nt
LRK55_RS14340 and LRK55_RS14345 are separated by 82 nucleotides
LRK55_RS14345 and LRK55_RS14350 are separated by 27 nucleotides
LRK55_RS14350 and LRK55_RS14355 are separated by 92 nucleotides
LRK55_RS14355 and LRK55_RS14360 are separated by 0 nucleotides
LRK55_RS14340: LRK55_RS14340 - peptidase S10, at 3,165,140 to 3,166,645
_RS14340
LRK55_RS14345: LRK55_RS14345 - NADPH-dependent FMN reductase, at 3,166,728 to 3,167,354
_RS14345
LRK55_RS14350: LRK55_RS14350 - LysE family translocator, at 3,167,382 to 3,167,978
_RS14350
LRK55_RS14355: LRK55_RS14355 - LysR substrate-binding domain-containing protein, at 3,168,071 to 3,168,976
_RS14355
LRK55_RS14360: LRK55_RS14360 - thioredoxin TrxC, at 3,168,977 to 3,169,420
_RS14360
Group
Condition
LRK55
_RS14340
LRK55
_RS14345
LRK55
_RS14350
LRK55
_RS14355
LRK55
_RS14360
pH
R2A_PIPES pH 4.25
-0.1
+0.4
-0.1
-1.4
N.D.
no stress control
no stress control
+0.1
-0.2
-0.3
-0.2
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
-0.0
-0.1
-0.5
+0.1
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
-0.2
-0.2
-0.2
N.D.
pH
R2A_PIPES pH 4.25
+0.1
+0.2
-0.8
+0.0
N.D.
no stress control
no stress control
+0.1
-0.1
-0.3
-0.1
N.D.
no stress control
no stress control
-0.1
-0.0
-0.0
-0.0
N.D.
stress
R2A with Zinc chloride 2560 uM
-0.2
+0.1
-0.0
-0.0
N.D.
no stress control
no stress control
+0.1
+0.2
-0.2
-0.1
N.D.
stress
R2A_PIPES with Aluminum chloride 0.140625 mM
+0.2
+0.1
-0.5
+0.1
N.D.
pH
R2A_PIPES pH 4.5
-0.2
+0.1
+0.1
+0.0
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.0
-0.2
+0.1
+0.2
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.1
+0.1
-0.0
+0.0
N.D.
no stress control
no stress control
+0.1
+0.2
-0.5
+0.2
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.1
+0.1
-0.2
+0.2
N.D.
pH
R2A_PIPES pH 4.5
-0.0
+0.2
-0.0
+0.2
N.D.
no stress control
no stress control
+0.0
-0.1
+0.4
-0.1
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.0
+0.1
+0.1
+0.0
N.D.
stress
R2A with Nickel (II) chloride 1696 uM
+0.1
+0.1
+0.3
-0.1
N.D.
stress
R2A_PIPES with Cadmium chloride 64 uM
-0.0
+0.2
+0.2
+0.1
N.D.
stress
R2A with Zinc chloride 2560 uM
-0.1
+0.5
-0.2
+0.1
N.D.
no stress control
no stress control
-0.0
+0.4
+0.2
-0.1
N.D.
stress
R2A with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.2
+0.1
+0.2
N.D.
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